Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq25442 82.4 6e-11 >seq25442 Length=71287 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || ||||| || || || || || |||||||| ||| | || |||| | Sbjct 26741 AAAATGCAGATCTTTGTGAAGACCTTGACTGGGAAAACCATCACCCTAGAGGTGGAGCCC 26800 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| || | | | || || ||||| ||||| |||||| | || || Sbjct 26801 AGCGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGAC 26860 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || ||||||||||| || | | || | | |||||| Sbjct 26861 CAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGACTAC 26920 Query 107733 AACATTCAAAAGGAGTCTAC 107752 ||||| || |||||||| || Sbjct 26921 AACATCCAGAAGGAGTCCAC 26940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398736390754387