Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq25442 93.3 3e-14 >seq25442 Length=71287 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || ||||| || || || ||||| || || | | ||||| ||| || || ||| Sbjct 26946 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGCTGT 26887 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | |||| || ||||| || || ||||| || || || || || | || Sbjct 26886 TTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTG 26827 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||||| | || | ||||| | || || || || || || ||||| ||||| Sbjct 26826 GCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTTTTCCCAGTC 26767 Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || ||||| ||||||||||| Sbjct 26766 AAGGTCTTCACAAAGATCTGCATTTT 26741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385083598387503