Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq25602 91.5 2e-13 >seq25602 Length=68118 Score = 91.5 bits (100), Expect = 2e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| || || ||||| | ||| | || || || || || || ||||||||||| Sbjct 9026 CTTCAAGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAA 8967 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || || | ||| || | ||| || ||||| ||||| | Sbjct 8966 CGGTACACCCAGTCCCATGTCTCCAGAACGCTGATATAACTGACAAGAGAGTTCCCCATT 8907 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | |||||||||||| || ||||| || || || ||||| || Sbjct 8906 TAAAATGTAAAACTGGCAGAGAGCATGGCATGGAGGGAGAGCCATTGC 8859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583277338951200