Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5804 407 4e-108 seq25442 122 3e-22 seq21159 114 4e-20 seq23752 107 6e-18 seq27101 102 2e-16 seq23897 102 2e-16 seq8970 98.7 3e-15 seq21071 87.8 5e-12 >seq5804 Length=195880 Score = 407 bits (450), Expect = 4e-108 Identities = 988/1479 (67%), Gaps = 23/1479 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || ||||| || || || || || || || || || || | |||| ||| | | Sbjct 178899 GCCATAGGCATTGACTTGGGCACCACGTACTCCTGCGTCGGAGTTTTCCAACACGGGAAA 178958 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || ||||| ||| | || ||||| || ||||| ||||| Sbjct 178959 GTGGAGATTATCGCCAACGACCAAGGCAACCGCACTACGCCGAGCTATGTTGCCTTTACG 179018 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||| || | || || ||| | || || || |||| ||| ||||| || || Sbjct 179019 GACACTGAACGCCTCATCGGAGATGCAGCCAAGAACCAAGTGGCTATGAATCCCAACAAC 179078 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || | |||||||| ||||| || ||||| | | ||| |||| | | || || Sbjct 179079 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAATTTGATGACTCAACGGTGCAGTCC 179138 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || | ||||| ||| || ||| ||| || | || | | | Sbjct 179139 GATATGAAGCACTGGCCTTTCCGTGTGGTGAGCGAAG-CGGGGA--AGCCCAAGGTACAA 179195 Query 349499 GTTGAATATAAAGGTGAA--CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 || || ||||| |||| ||| | | || || || ||||||||||| || ||||| | Sbjct 179196 GTCGAGTATAAGTGTGAGGTCAAGACC--TTCTTTCCTGAAGAAATTTCCTCTATGGTAT 179253 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA-TGCTGTT 349615 | |||||||||||||| || || || || || ||| | ||| | || |||||| Sbjct 179254 TGACCAAAATGAAGGAAATAGCCGAGGCTTACTTGGGTCGCAAAGT-CCAGAGTGCTGTA 179312 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 ||||||||||| || || || ||||| |||| || || || |||||||| || | | Sbjct 179313 ATTACTGTACCTGCATACTTCAATGACTCCCAACGCCAAGCCACCAAAGATGCCGGTACC 179372 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||| | || | ||||| | | || |||||||| || || ||||| || ||||| ||| Sbjct 179373 ATTACAGGTCTCAATGTATTGCGCATCATTAATGAGCCGACGGCTGCTGCCATTGCCTAT 179432 Query 349736 GGGCTTGATAAAA---TGAG-TGACCA--AGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || | ||||||| ||| || || || || ||| | || || ||||| || ||| Sbjct 179433 GGTTTGGATAAAAAAGGGAGCAGAGCAGGTGAGAAGAATGTGCTGATCTTTGACTTGGGT 179492 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||| || |||||||| || | | || ||||||| || || |||||||| ||| | Sbjct 179493 GGTGGCACATTTGATGTTTCCATTTTGACCATTGAAGATGGCATCTTTGAAGTGAAATCT 179552 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 |||||||| ||||| ||| | ||||| || || ||||| ||||| | || |||||| Sbjct 179553 ACTGCTGGAGATACCCATTTGGGTGGGGAGGACTTTGACAATCGCATGGTGAGCCATTTT 179612 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || | ||||| ||||| ||||| ||| ||| |||| | || ||||| | || Sbjct 179613 GTGGAGGAATTCAAGCG-CAAGCATAAGCGTGACATTGCTGGCAACAAGCGAGCAGTTCG 179671 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 || || | || || |||||| | || || ||| || | || | ||||| | || Sbjct 179672 ACGGCTCCGCACAGCCTGTGAAAGAGCCAAACGTACCCTGAGTTCCTCCACCCAGGCTTC 179731 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 |||||| ||||| || | |||||||| ||||||| |||| ||||| |||||||| Sbjct 179732 TATTGAGATTGACTCGTTATTTGATGGCATTGATTTCTACACATCAATTACCCGTGCTCG 179791 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 ||||| || | | ||||| || | | || | || |||||||| || | | Sbjct 179792 CTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGTACTCTTGAACCTGTGGAGAAGGCTCT 179851 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 ||||| || | |||| |||||| ||||| | ||| | ||||| || || || Sbjct 179852 TCGTGATGCTAAGCTAGACAAAGGACAGATTAATGAAATTGTTCTGGTTGGAGGCTCAAC 179911 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 ||||| || || | ||| |||| || || || |||||||| ||||| | | Sbjct 179912 TCGTATCCCCAAGATCCAAAAGTTGCTCCAAGACTTCTTTAATGGAAAAGAGCTAAACAA 179971 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATC 350328 | || ||||| ||||||||||| ||||||||||||||||| ||||| ||||| || Sbjct 179972 AAGCATAAATCCTGATGAAGCTGTGGCATATGGTGCTGCTGTGCAGGCTGCTATTCTAAT 180031 Query 350329 TGGAAATAAGAGTTCTAAAA--TTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || | | | | | |||| | | || || | || || |||||| | |||||||| Sbjct 180032 GGGTGACA--AATCCGAAAACGTGCAAGACCTGCTGCTGCTTGATGTAGCACCACTTTCT 180089 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTA-GAAATAGTACTGT 350445 || || | || ||| |||||| || ||||||| |||| || | | || | ||| | Sbjct 180090 CTGGGTATTGAGACTGCTGGTGGTGTGATGACTG-CCTTAATCAAACGTAACACAACTAT 180148 Query 350446 ACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAAT 350505 || || || | |||| || || | || | | |||| || ||| || | Sbjct 180149 TCCCACCAAGCAAACCCAGACCTTCACCACCTATTCAGACAACCAGAGTAGTGTGCTGGT 180208 Query 350506 TCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTAC 350565 ||||| | ||| ||||| | || || || || |||||| || || | ||| Sbjct 180209 ACAAGTGTATGAGGGTGAGAGAGCCATGACCAAGGACAATAATCTGCTGGGCAAGTTTGA 180268 Query 350566 CCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATAT 350625 ||| | | |||||||| ||| | || || || || ||||| || | || || || Sbjct 180269 CCTGACAGGTATTCCACCTGCACCTCGTGGTGTGCCCCAAATTGAGGTGACGTTTGACAT 180328 Query 350626 TGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 |||| |||||||||| | |||||||| ||||| || || Sbjct 180329 TGATGCAAATGGTATCCTCAATGTTACTGCAGTGGACAA 180367 Score = 196 bits (216), Expect = 1e-44 Identities = 586/894 (66%), Gaps = 14/894 (2%) Strand=Plus/Minus Query 182904 TTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATC 182963 || || | ||| ||||||| | |||||||| | |||| ||||| | || ||||| Sbjct 180367 TTGTCCACTGCAGTAACATTGAGGATACCATTTGCATCAATGTCAAACGTCACCTCAATT 180308 Query 182964 TGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTA 183023 || || ||||| || || |||||||| || || | ||| | || | |||| Sbjct 180307 TGGGGCACACCACGAGGTGCAGGTGGAATACCTGTCAGGTCAAACTTGCCCAGCAGATTA 180248 Query 183024 TTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAAT-AGTA-ACTGCTGGCTGAT 183081 || || || || | |||||||| || ||||| ||||| | || | ||| || ||| | Sbjct 180247 TTGTCCTTGGTCATGGCTCTCTCACCCTCATACACTTGTACCAGCACACTACT--CTGGT 180190 Query 183082 TATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAA 183141 | || ||| || | || || ||| || | |||||||||| || || | Sbjct 180189 TGTCTGAATAGGTGGTGAAGGTCTGGGTTTGCTTGGTGGGAATAGTTGTGTTACGTTTGA 180130 Query 183142 CAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTA 183201 | ||||||| || | | ||||| || | || | || | |||||||||||| | Sbjct 180129 TTAAGGCAGTCATCACACCACCAGCAGTCTCAATACCCAGAGAAAGTGGTGCTACATCAA 180070 Query 183202 GTAATAATAAATCTG--ATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAAC 183259 | | | | ||| | ||||| | ||||| | | ||| ||| ||||| || || Sbjct 180069 GCAGCAGCAGGTCTTGCACGTTTT--CGGATTTGTCACCCATTAGAATAGCAGCCTGCAC 180012 Query 183260 AGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATT 183319 ||| ||||||||||| ||||||||||| || || || || ||||| ||||| Sbjct 180011 AGCAGCACCATATGCCACAGCTTCATCAGGATTTATGCTTTTGTTTAGCTCTTTTCCATT 179952 Query 183320 AAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATAC 183379 ||| || ||| |||| | ||| || || || || | |||||| || || || | || Sbjct 179951 AAAGAAGTCTTGGAGCAACTTTTGGATCTTGGGGATACGAGTTGAGCCTCCAACCAGAAC 179892 Query 183380 TACTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438 | ||||| || | | |||| ||| || | ||| | | | || || ||||| | Sbjct 179891 AATTTCATTAATCTGTCCTTTGTCTAGCTTA-GCATCACGAAGAGCCTTCTCCACAGGTT 179833 Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498 | | ||| | || | ||| | | ||| || || | || | || | |||| Sbjct 179832 CAAGAGTACCACGGAAGAGATCAGCATTGAGCTCCTCAAAGCGAGCACGGGTAATTGATG 179773 Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558 | || ||||| |||| | |||| || ||||| ||||| || | || || || || Sbjct 179772 TGTAGAAATCAATGCCATCAAATAACGAGTCAATCTCAATAGAAGCCTGGGTGGAGGAAC 179713 Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATC--TTGGATT 183616 | || | ||| |||| |||||| ||||| | || || || | || || ||| || Sbjct 179712 TCAGGGTACGTTTGGCTCTTTCACAGGCTGTGCGGAGCCGTCGAACTGCTCGCTTG--TT 179655 Query 183617 ATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCT 183676 | | ||| || | ||||| || | || ||||| | |||||| | | | Sbjct 179654 GCCAGCAATGTCACGCTTATGCTTGCGCTTGAATTCCTCCACAAAATGGCTCACCATGCG 179595 Query 183677 TGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATAT 183736 | ||||| || || ||||| ||||| ||||| |||||||||| ||| |||||||| || Sbjct 179594 ATTGTCAAAGTCCTCCCCACCCAAATGGGTATCTCCAGCAGTAGATTTCACTTCAAAGAT 179535 Query 183737 TCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || |||||||| | ||||| || ||||||||||| ||||||||||| ||||| Sbjct 179534 GCCATCTTCAATGGTCAAAATGGAAACATCAAATGTGCCACCACCCAAGTCAAA 179481 >seq25442 Length=71287 Score = 122 bits (134), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 || || || || ||||| || || || || || ||||| | || || |||||||| || Sbjct 26949 AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGC 26890 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 ||||| ||||||||||| || | ||||| ||||||||||| ||||| |||||||| || Sbjct 26889 TGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATC 26830 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || || || ||||| | || || || || || || || | || || || Sbjct 26829 TTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTTTTCCCA 26770 Query 140712 GTTAGTGTTTTTACAAAAATCTGCATT 140738 || | || || ||||| ||||||||| Sbjct 26769 GTCAAGGTCTTCACAAAGATCTGCATT 26743 >seq21159 Length=141513 Score = 114 bits (126), Expect = 4e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 ||| | ||| |||| || || || || ||||| |||||||| || ||||||| || Sbjct 70716 ACAATTACTAATGCAGTAATCACCGTCCCAGCTTATTTTAACGACTCCCAGCGGCAAGCC 70657 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 || |||||||| |||| |||||| || | |||||||| | || || ||||||||||| Sbjct 70656 ACCAAAGATGCCGGCACCATTGCTGGCCTGAATGTTCTTCGCATCATCAATGAACCCACA 70597 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 || ||||| ||||| ||||| || ||||||| Sbjct 70596 GCGGCAGCCATTGCGTATGGTCTGGATAAAA 70566 Score = 111 bits (122), Expect = 5e-19 Identities = 229/336 (68%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 |||| | || |||||||| | ||||||||||| ||||| || || | || || |||| Sbjct 70115 AAATGTCCTCATTTTTGACCTGGGTGGTGGTACCTTTGACGTGTCCATTCTGACGATTGA 70056 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 || || || |||||||| ||| | || ||||| || || || || ||||| || ||||| Sbjct 70055 GGACGGCATCTTTGAAGTGAAATCGACGGCTGGAGACACTCACCTGGGTGGTGAGGATTT 69996 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943 ||| ||||| | || || ||||| ||| || ||||| ||||| ||| | || | Sbjct 69995 TGACAATCGCATGGTGAACCACTTTGTCTCAGAGTTCAAGCG-CAAGCATAAGAAGGACA 69937 Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003 | ||| || | || | || || || | || || || || || || ||||| Sbjct 69936 TCACAGACAACAAGCGGGCCGTCCGGCGGCTGCGCACAGCTTGCGAGCGGGCCAAGCGCA 69877 Query 350004 CCTTATCATCTACT--ACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061 || ||| || || ||||| | || ||||||||||| || || ||| |||| || Sbjct 69876 CC--CTCAGCTCCTCCACCCAGGCTTCCATTGAAATTGACTCCCTCTATGAGGGCATTGA 69819 Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097 || | | || || || || ||||| ||||| || Sbjct 69818 CTTTTACACCTCCATCACCCGGGCTCGCTTTGAGGA 69783 Score = 102 bits (112), Expect = 2e-16 Identities = 199/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 183502 aaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATA 183561 |||||||||| || | ||| | ||| ||||||||||| || | || || || || | Sbjct 69814 AAAAGTCAATGCCCTCATAGAGGGAGTCAATTTCAATGGAAGCCTGGGTGGAGGAGCTGA 69873 Query 183562 ATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATC--TTGGATTATC 183619 || | || || || || || ||||| | || || || | | | ||| || || Sbjct 69874 GGGTGCGCTTGGCCCGCTCGCAAGCTGTGCGCAGCCGCCGGACGGCCCGCTTG--TTGTC 69931 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 ||| || || | ||||| || | || || || | | ||| || | | | | | Sbjct 69932 TGTGATGTCCTTCTTATGCTTGCGCTTGAACTCTGAGACAAAGTGGTTCACCATGCGATT 69991 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 |||||||| |||||||| | || || || ||||| || | ||| |||||||| || || Sbjct 69992 GTCAAAATCCTCACCACCCAGGTGAGTGTCTCCAGCCGTCGATTTCACTTCAAAGATGCC 70051 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 ||| ||||| | | ||| || || ||||| ||||||||||||| |||||| Sbjct 70052 GTCCTCAATCGTCAGAATGGACACGTCAAAGGTACCACCACCCAGGTCAAAA 70103 >seq23752 Length=299569 Score = 107 bits (118), Expect = 6e-18 Identities = 246/366 (67%), Gaps = 17/366 (5%) Strand=Plus/Plus Query 349304 TACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCT 349363 || || ||||| || | |||||| | | ||||||| ||||||| | |||| || Sbjct 107202 TATGTGGCATTCACAAATACTGAGAG----ACTGGTGATGCTGCAAAGTACCAAGTGGCA 107257 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423 ||||| ||| || || |||||||| |||| | || || |||| ||| ||| Sbjct 107258 ATGAATCCCCCAAACACAGTCTTTGATGCCAAGCATTTGATCGGCCGAAGATTTGATGAT 107317 Query 349424 AAATCTACA---CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGT 349480 ||| | || || || | || |||| || || || ||||| || || | | Sbjct 107318 ---TCTGTAGTTCAGTCGGACATGAAGCATTGGCCCTTCACAGTTGTG---AACGATGCT 107371 Query 349481 GATAAACCAATTATTGAGGTTGAATATAAAGGTGAA--CAAAAACAATTTTTACCCGAAG 349538 | | ||| | | || ||||| |||| ||| ||||| | |||| || |||| Sbjct 107372 GGCAGACCCAAAGACCAAGTGGAATACAAAGCAGAATGCAAAAGC--TTTTATCCTGAAG 107429 Query 349539 AAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAA 349598 ||||||| |||||||| || |||||||||||| || || || || ||| |||| | | Sbjct 107430 AAATTTCTTCAATGGTGCTAACTAAAATGAAGGAGATGGCAGAGGCCTATCTAGGAAAGA 107489 Query 349599 CAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAA 349658 | || || ||||||| | || || ||||| ||||| ||||| |||||||| || | Sbjct 107490 CTGTTACAAATGCTGTGGTCACAGTCCCAGCTTATTTCAATGACTCCCAGCGTCAGGCTA 107549 Query 349659 CAAAAG 349664 |||||| Sbjct 107550 CAAAAG 107555 >seq27101 Length=56424 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||||||||| ||||| |||||||| || || || || ||||| | || || |||||| Sbjct 16186 AGAACAAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 16127 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 || || || || ||||| ||||| || | ||||| || |||||||| ||||| ||||| Sbjct 16126 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATC 16068 >seq23897 Length=295440 Score = 102 bits (112), Expect = 2e-16 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || || || ||||| || |||| ||| | ||| ||| || ||| Sbjct 229504 GGGATTGATCTGGGCACCACCTATTCCTGCGTTGGTGTCTTCCAACATGGCAAGGTGGAA 229445 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| ||||| || |||||||| || |||||| || || ||||| || || ||| Sbjct 229444 ATCATTGCCAATGACCAGGGTAACAGGACTACGCCAAGCTATGTGGCATTCACAGATACT 229385 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 ||| | ||||||||||| ||||||| || |||| || ||||| | ||| || || Sbjct 229384 GAGAGACTGATTGGTGATGCTGCAAAGAACCAAGTGGCAATGAATCCCACAAACACAGTC 229325 Query 349385 TTTG 349388 |||| Sbjct 229324 TTTG 229321 Score = 89.7 bits (98), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| | || || ||||| ||||| ||||| |||||||| || |||||||||| Sbjct 228518 ATGCTGTGGTCACAGTCCCAGCTTATTTCAATGACTCCCAGCGTCAGGCTACAAAAGATG 228459 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | |||||| || | ||||| || |||| ||||| || || || || || || | Sbjct 228458 CCGGAACCATTGCTGGTCTCAATGTGCTTCGAATTATTAACGAGCCAACCGCAGCTGCGA 228399 Query 349728 TTGCATATGGGCTTGATAAAA---TGAGTG 349754 |||| || || | || |||| |||||| Sbjct 228398 TTGCTTACGGCTTAGACAAAAAAGTGAGTG 228369 >seq8970 Length=181473 Score = 98.7 bits (108), Expect = 3e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || ||||| ||||| || | ||| || |||||||| || |||||||| ||||||| Sbjct 139359 CTTTCTGGATATTGTAATCTGAGAGTGTACGTCCATCTTCCAGCTGTTTTCCCGCAAAGA 139418 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| ||||||||||||||||| ||| Sbjct 139419 TCAGACGCTGCTGATCAGGAGGAATGCCT 139447 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||| || ||||||||||| || || ||||| ||||| | ||| ||| || || ||| Sbjct 140735 CCTTCCTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACCTCA 140794 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || || ||||| || ||||| ||||||||||||||| Sbjct 140795 AGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAAATCTGCATT 140839 >seq21071 Length=136756 Score = 87.8 bits (96), Expect = 5e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||| |||||||| | || |||| |||||||| ||| |||| || |||||||||| Sbjct 35949 CATTCCATAGAAAAGCTTCACTTTTTTACCATTTTTTTCTACAATATCTCCAGCACATTG 36008 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCC 130771 |||||| | || ||||| || || ||||| ||||||||||| || ||||| Sbjct 36009 GTCATGTCCTGCAAACATGCCCCCCAGCATCACAAAATCAGCACCAGCTCC 36059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514693659748049