Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq5893 136 5e-27 >seq5893 Length=194688 Score = 136 bits (150), Expect = 5e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| |||| || |||| || | || || ||||| || || ||||| || || || Sbjct 56692 ATAGCAGGAGCTTTATGGTGGTACTACATATCCAAAGGGATTGAGTATCTGGACACAATA 56751 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 |||||||| | ||||||||||| || ||| | |||||| | ||||| || |||||||| Sbjct 56752 TTCTTCATCCTAAGAAAGAAATTCAATCAAATCAGCTTTCTTCACGTCTATCACCATTTC 56811 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || |||||||||||| | ||||| || || || ||| ||||||||||||| Sbjct 56812 ACTATGTTTACTTTATGGTGGATTGGCATAAAGTGGGTTGCAGGAGGACA 56861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602963029111920