Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq282 100 2e-16 >seq282 Length=228141 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 ||||| || ||||| ||||||||||| ||||| ||||| | ||||| || |||||||| Sbjct 162367 GTTGTGGAAGAGCTGTTCCGAGATGGAGTAAATTGGGGAAGGATTGTGGCATTCTTTGAA 162308 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 |||||||| | ||||||||||||| |||| | | | || | | || || |||| Sbjct 162307 TTTGGTGGCATGCTGTGTGTGGAAAGTGTCAGTCGGGAGATGTCGCCTCTGGTGGACAGT 162248 Query 3365 ATTGCCGCGTGGATGACAGA 3384 ||||| | |||||||| || Sbjct 162247 ATTGCTGAATGGATGACTGA 162228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414330899374012