Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq84 102 1e-16 >seq84 Length=3616636 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||||| | ||| || ||||| | ||| |||||||| || || || || Sbjct 1912778 AGGCCTGTGACATGGGCAATCATATACGTCAGTAAGGAATAGCTGGCAATATTAAATGGA 1912719 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || ||||||| || || || | ||| ||||| |||||||| || ||||| Sbjct 1912718 ACGCCAAGCCCCACATCTCCTGATCTCTGATACAGTTGGCAGGACAGTTCCCCATTTAGT 1912659 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||||||| || || ||||||||| || || ||||| Sbjct 1912658 ACGTAGAACTGACAGAGAGCGTGGCAGGGAGGGAGAGCCAT 1912618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589920400144160