Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq84 96.9 2e-15 >seq84 Length=3616636 Score = 96.9 bits (106), Expect = 2e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| |||||| | || | || |||||||| ||||| ||||| || || || Sbjct 1912772 GTGACATGGGCAATCATATACGTCAGTAAGGAATAGCTGGCAATATTAAATGGAACGCCA 1912713 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || |||| ||| ||||||| ||||| | || ||||| || | |||| || || Sbjct 1912712 AGCCCCACATCTCCTGATCTCTGATACAGTTGGCAGGACAGTTCCCCATTTAGTACGTAG 1912653 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCT 97284 ||||||| | | || ||||| || | ||||| || ||||||||| Sbjct 1912652 AACTGACAGAGAGCGTGGCAGGGAGGGAGAGCCATCTTAGGAACATCT 1912605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346694382778280