Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq94 136 5e-27 seq1 107 2e-18 seq3244 104 3e-17 seq479 104 3e-17 seq67 100 3e-16 seq9971 98.7 1e-15 seq4167 98.7 1e-15 seq3104 98.7 1e-15 seq1894 98.7 1e-15 seq567 98.7 1e-15 seq518 98.7 1e-15 seq325 98.7 1e-15 seq290 98.7 1e-15 seq3059 96.9 4e-15 seq2299 96.9 4e-15 seq14419 95.1 1e-14 seq2771 95.1 1e-14 seq2183 95.1 1e-14 seq1809 95.1 1e-14 seq1714 95.1 1e-14 seq687 95.1 1e-14 seq131 95.1 1e-14 seq188 93.3 5e-14 seq1088 91.5 2e-13 seq804 91.5 2e-13 seq5564 89.7 6e-13 seq4446 89.7 6e-13 seq3302 89.7 6e-13 seq859 89.7 6e-13 seq829 89.7 6e-13 seq677 89.7 6e-13 seq51 87.8 2e-12 seq20295 86.0 7e-12 seq11426 86.0 7e-12 seq8576 86.0 7e-12 seq4840 86.0 7e-12 seq4435 86.0 7e-12 seq502 84.2 3e-11 seq360 84.2 3e-11 seq1397 82.4 9e-11 >seq94 Length=3237593 Score = 136 bits (150), Expect = 5e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 42952 ATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 43011 |||| || ||||| | ||||| |||||| |||| |||| ||| || ||||| ||||| | Sbjct 38324 ATTGCCC-CCTCTCAGACGCAGCACCAAGTGCAGTGTGGACTCTTTCTGAATGTTGTAGT 38382 Query 43012 CAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGG 43071 ||| ||| || || | || || |||||||| ||||| || || || ||||||||||||| Sbjct 38383 CAGACAGTGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGG 38442 Query 43072 CCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATT 43131 || | || || |||||| |||||| || | || | | ||||| || | | Sbjct 38443 GGGGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCT 38502 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 38503 CTACCTCAAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 38554 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | ||||| ||||||||| | ||| ||| || || || ||||| || | Sbjct 39240 CCTCCTCTGAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAA 39299 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || ||||||||||| |||||||| || || ||||| || || | || Sbjct 39300 AGTGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCTGGTGGG 39359 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | |||||||||| |||||| || | || | | ||||| || | ||| || Sbjct 39360 ATACCCTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCTACC 39419 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||||||||| || || ||||| |||||||| ||||| Sbjct 39420 TCAAGTGTGATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 39466 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | |||||||||||| |||| |||| ||||| || || ||||| |||| | Sbjct 38784 CCGCCTCTCAGACGCAACACCAAGTGCAGTGTGGATTCCTTCTGGATGTTGTAGTCAGAC 38843 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| ||||| || || || |||||||| || | || Sbjct 38844 AGTGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGGGGA 38903 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| |||||| || | | | | ||||| || | ||| || Sbjct 38904 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGTTCAACC 38963 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| ||||| || ||||| Sbjct 38964 TCCAATGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 39010 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | ||||| ||||| ||| | || || || || || ||||| || | | Sbjct 39012 CCTCCTCTCAGACGCAGCACCAGATGGAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAC 39071 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||||||| |||||||| || || || ||||||||||||| || Sbjct 39072 AGTGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATCAGACGCTGCTGGTCGGGTGGA 39131 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || |||||| ||| || |||| || | | ||||| || | |||||| Sbjct 39132 ATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACT 39191 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| |||||||| ||||| Sbjct 39192 TCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 39238 >seq1 Length=18507834 Score = 107 bits (118), Expect = 2e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| |||| |||||| |||||| ||||||||||||||||||||| |||||||||| Sbjct 2803325 TTCCTCCCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 2803384 Query 60123 CTATACTACCGAGGATT 60139 ||||||||||||||||| Sbjct 2803385 CTATACTACCGAGGATT 2803401 >seq3244 Length=6917 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 2511 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2570 Query 60118 CACCACTATACTACCGAGGATT 60139 ||||||||||||| |||||||| Sbjct 2571 CACCACTATACTAACGAGGATT 2592 >seq479 Length=88402 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||||||| | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 72734 AAAATGATCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 72675 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 72674 AACCACTATACTAACGAGGATT 72653 >seq67 Length=4186129 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3369653 TCTCCCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3369594 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 3369593 ATACTACCGAGGA 3369581 >seq9971 Length=1502 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 1295 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1354 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 1355 AACCACTATACTAACGAGGATT 1376 >seq4167 Length=5225 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 2127 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2068 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 2067 AACCACTATACTAACGAGGATT 2046 >seq3104 Length=7282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 2051 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2110 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 2111 AACCACTATACTAACGAGGATT 2132 >seq1894 Length=11518 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 8692 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 8751 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 8752 AACCACTATACTAACGAGGATT 8773 >seq567 Length=63060 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 13023 AAAATAATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 12964 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 12963 AACCACTATACTAACGAGGATT 12942 >seq518 Length=74296 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 44909 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 44968 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 44969 AACCACTATACTAACGAGGATT 44990 >seq325 Length=287866 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 269950 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 270009 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 270010 AACCACTATACTAACGAGGATT 270031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| | | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 27468 AAAATAATCTCCCCATCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGTGATACT 27527 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 27528 AACCACTATACTAACGAGGATT 27549 >seq290 Length=389319 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||||||| | |||||| |||||| |||||||| |||||||||||| ||||| Sbjct 29280 AAAATGATCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCACGTGACAGGCGGGGATACT 29221 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 29220 AACCACTATACTAACGAGGATT 29199 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||| ||||| ||||| ||||||| Sbjct 195932 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACTGGCGGGGATACTAACCACTA 195991 Query 60126 TACTACCGAGGATT 60139 ||||| |||||||| Sbjct 195992 TACTATCGAGGATT 196005 >seq3059 Length=7379 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 5381 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 5440 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||| ||||||| Sbjct 5441 AACCACTATACTAACGAGGAT 5461 >seq2299 Length=9690 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 6936 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 6995 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||| ||||||| Sbjct 6996 AACCACTATACTAACGAGGAT 7016 >seq14419 Length=1184 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 279 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 338 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 339 AACCACTATACTAACGAGGATT 360 >seq2771 Length=8156 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| | ||||||| |||||||||||| ||||| Sbjct 7047 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGATCTCCCGAGTGACAGGCGGAGATACT 7106 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 7107 GACCACTATACTAACGAGGATT 7128 >seq2183 Length=10194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 5542 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 5483 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 5482 AACCACTATACTAACGAGGATT 5461 >seq1809 Length=11981 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||| ||||||||||||||||| ||||| Sbjct 3124 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTATCCCGCGTGACAGGCGGGGATACT 3183 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 3184 AACCACTATACTAACGAGGATT 3205 >seq1714 Length=12628 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 852 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 793 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 792 GACCACTATACTAACGAGGATT 771 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 12025 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 12084 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 12085 GACCACTATACTAACGAGGATT 12106 >seq687 Length=44948 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 775 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 716 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 715 GACCACTATACTAACGAGGATT 694 >seq131 Length=2021475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 242815 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 242874 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 242875 GACCACTATACTAACGAGGATT 242896 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| |||||||||||||||||||| ||||| Sbjct 247480 AAAATAACCTCCCCGTCGGGGAATTGAACCCCAGTCTCCCGCGTGACAGGCGGGGATACT 247539 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 247540 GACCACTATACTAACGAGGATT 247561 >seq188 Length=996013 Score = 93.3 bits (102), Expect = 5e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| || ||||||||||||||||| ||||| Sbjct 41845 AAAATGATCTCCCCGTCGGGGAATTGAACCCGCGTTTCCCGCGTGACAGGCGGGGATACT 41786 Query 60118 CACCACTATACTACCGAGGATTGA 60141 ||| ||||||||| |||||||||| Sbjct 41785 CACTACTATACTAACGAGGATTGA 41762 >seq1088 Length=20193 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 6638 AAAATAACCTCCCCGTCGGGGAATTGAACCC-GGTCTCCCGCGTGACAGGCGGGGATACT 6580 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 6579 AACCACTATACTAACGAGGATT 6558 >seq804 Length=31283 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 19235 AAAATAATCTCCCCGTCGGGGAATTGAACCC-GGTCTCCCGCGTGACAGGCGGGGATACT 19293 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| | |||||| Sbjct 19294 AACCACTATACTAACAAGGATT 19315 >seq5564 Length=3675 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 2261 AAAATAACCTCCCCGTCTGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2320 Query 60118 CACCACTATACTACCGAGGATT 60139 ||||||||| || |||||||| Sbjct 2321 GACCACTATAATAACGAGGATT 2342 >seq4446 Length=4813 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| ||||||||||||||||||||| | ||| Sbjct 4313 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGACACT 4372 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 4373 AACCACTATACTAACGAGGATT 4394 >seq3302 Length=6781 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| | ||||||||||||||||||| ||||| Sbjct 6069 AAAATAACCTCCACGTCGGGGAATTGAACCCCGTTCTCCCGCGTGACAGGCGGGGATACT 6128 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 6129 AACCACTATACTAACGAGGATT 6150 >seq859 Length=28572 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| | | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 19490 AAAATAATCTCCCCATCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 19549 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| ||| |||| Sbjct 19550 AACCACTATACTAACGATGATT 19571 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||| | || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 7528 AAAATGATCTACCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 7587 Query 60118 CACCACTATACTACCGAGGAT 60138 || ||||||||| ||||||| Sbjct 7588 AACGACTATACTAACGAGGAT 7608 >seq829 Length=30080 Score = 89.7 bits (98), Expect = 6e-13 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 |||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 2297 GGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTAACGAG 2356 Query 60136 GATT 60139 |||| Sbjct 2357 GATT 2360 >seq677 Length=46472 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| || | |||||| |||||| |||||| |||||||||||||| ||||| Sbjct 13979 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCACGCGTGACAGGCGGGGATACT 13920 Query 60118 CACCACTATACTACCGAGGATT 60139 | |||||||||| |||||||| Sbjct 13919 AAGCACTATACTAACGAGGATT 13898 >seq51 Length=4861936 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| ||||||||||| |||||| |||||||| | |||||||||| ||||| | || | Sbjct 3712530 TCTCCCCGGCAGGGAATTGAACCCCGGTCTCCCCCATGACAGGCGGGGATACTAAGCATT 3712471 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 3712470 ATACTACCGAGGA 3712458 >seq20295 Length=1016 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| | | || ||| |||||| ||||||||||||||||||||| ||||| Sbjct 540 AAAATGATCTCCCCATCGGGCAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 481 Query 60118 CACCACTATACTACCGAGGATT 60139 || ||||||||| |||||||| Sbjct 480 GACTACTATACTAACGAGGATT 459 >seq11426 Length=1354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| || | |||||| |||||| |||||| ||||||||||||| ||||| Sbjct 331 AAAATAACCTCCCCGTCGGGGAATTGAACCCCAGTCTCCTGCGTGACAGGCGGGGATACT 272 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 271 GACCACTATACTAACGAGGATT 250 >seq8576 Length=1741 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||||| | ||| | | |||||| |||||| | ||||||||||||||||||| ||||| Sbjct 1094 AAAATTATATCCCTGTCGGGGAATTGAACCCCGTTCTCCCGCGTGACAGGCGGGAATACT 1153 Query 60118 CACCACTATACTACCGAGGATT 60139 ||| |||||| || |||||||| Sbjct 1154 CACTACTATATTAACGAGGATT 1175 >seq4840 Length=4386 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| | | || ||| |||||| ||||||||||||||| ||||| ||||| Sbjct 900 AAAATGATCTCCCCATCGGGCAATTGAACCCCGGTCTCCCGCGTGACCGGCGGGGATACT 841 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 840 AACCACTATACTAACGAGGATT 819 >seq4435 Length=4828 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||||| | | || ||| |||||| ||||||||||||||| ||||| ||||| Sbjct 1819 AAAATGATCTCCCCATCGGGCAATTGAACCCCGGTCTCCCGCGTGACCGGCGGGGATACT 1878 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||| |||||||| Sbjct 1879 AACCACTATACTAACGAGGATT 1900 >seq502 Length=79167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 |||||| |||||| |||||||||| ||||||||| |||||||||||||||||| |||| Sbjct 72648 GGGAATTGAACCCCGGTCTCCCGCATGACAGGCGAGGATACTCACCACTATACTAACGAG 72589 Query 60136 GATT 60139 |||| Sbjct 72588 GATT 72585 >seq360 Length=199920 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 60079 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct 52883 AATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTAACGAGGAT 52942 Query 60139 T 60139 | Sbjct 52943 T 52943 >seq1397 Length=15350 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 |||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 6634 GGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGAATACTAACCACTATACTAACGAG 6575 Query 60136 GAT 60138 || Sbjct 6574 AAT 6572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571666039745120