Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq84 95.1 1e-14 >seq84 Length=3616636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||||| ||| |||||| | ||||| || || || || || || ||||| || Sbjct 1912605 AGATGTTCCTAAGATGGCTCTCCCTCCCTGCCACGCTCTCTGTCAGTTCTACGTACTAAA 1912664 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||| |||| || ||| ||||||| |||| | ||| |||| || || ||||| || Sbjct 1912665 TGGGGAACTGTCCTGCCAACTGTATCAGAGATCAGGAGATGTGGGGCTTGGCGTTCCATT 1912724 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 |||||||| || ||| | | || |||||||||||||| ||||| |||| Sbjct 1912725 TAATATTGCCAGCTATTCCTTACTGACGTATATGATTGCCCATGTCACAG 1912774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399080841373780