Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq84 125 6e-24 >seq84 Length=3616636 Score = 125 bits (138), Expect = 6e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| ||||| || || |||| ||||||||| | || |||||||| || ||||| | Sbjct 1912780 TCAGGCCTGTGACATGGGCAATCATATACGTCAGTAAGGAATAGCTGGCAATATTAAATG 1912721 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || || |||| || | || ||||| ||||| ||||||||||| ||||| Sbjct 1912720 GAACGCCAAGCCCCACATCTCCTGATCTCTGATACAGTTGGCAGGACAGTTCCCCATTTA 1912661 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||| |||||||| | | |||| || ||||||||||||||| Sbjct 1912660 GTACGTAGAACTGACAGAGAGCGTGGCAGGGAGGGAGAGCCATC 1912617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427665452521920