Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq84 104 2e-17 >seq84 Length=3616636 Score = 104 bits (114), Expect = 2e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| |||||| || | | ||||||||||||||| ||||| ||| Sbjct 1912778 AGGCCTGTGACATGGGCAATCATATACGTCAGTAAGGAATAGCTGGCAATATTAAATGGA 1912719 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || || | |||| ||||| || ||||||||||| || ||||| || || || | | Sbjct 1912718 ACGCCAAGCCCCACATCTCCTGATCTCTGATACAGTTGGCAGGACAGTTCCCCATTTAGT 1912659 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATC 20398 || || || ||||| | ||| ||||| || || |||||| Sbjct 1912658 ACGTAGAACTGACAGAGAGCGTGGCAGGGAGGGAGAGCCATC 1912617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441255814139360