Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq94 134 1e-26 seq1 98.7 1e-15 seq3244 95.1 1e-14 seq479 95.1 1e-14 seq67 91.5 2e-13 seq9971 89.7 6e-13 seq4167 89.7 6e-13 seq3104 89.7 6e-13 seq1894 89.7 6e-13 seq567 89.7 6e-13 seq518 89.7 6e-13 seq325 89.7 6e-13 seq290 89.7 6e-13 seq3059 87.8 2e-12 seq2299 87.8 2e-12 seq14419 86.0 7e-12 seq2771 86.0 7e-12 seq2183 86.0 7e-12 seq1809 86.0 7e-12 seq1714 86.0 7e-12 seq687 86.0 7e-12 seq131 86.0 7e-12 seq829 84.2 2e-11 seq360 84.2 2e-11 seq188 84.2 2e-11 seq1088 82.4 8e-11 seq804 82.4 8e-11 >seq94 Length=3237593 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||||| |||||| |||| |||| ||| || ||||| ||||| |||| | Sbjct 38328 CCCCCTCTCAGACGCAGCACCAAGTGCAGTGTGGACTCTTTCTGAATGTTGTAGTCAGAC 38387 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| ||||| || || || ||||||||||||| || Sbjct 38388 AGTGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGA 38447 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || |||||| |||||| || | || | | ||||| || | || || Sbjct 38448 ATGCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCTACC 38507 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 38508 TCAAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 38554 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||||| ||||||||| | ||| ||| || || || ||||| || | Sbjct 39240 CCTCCTCTGAGACGCAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAA 39299 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || ||||||||||| |||||||| || || ||||| || || | ||| Sbjct 39300 AGTGTGCGGCCATCTTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCTGGTGGG 39359 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||||| |||||| || | || | | ||||| || | ||| || Sbjct 39360 ATACCCTCCTTGTCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCTACC 39419 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||||||||| || || ||||| |||||||| ||||| Sbjct 39420 TCAAGTGTGATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 39466 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||||| ||||| ||| | || || || || || ||||| || | | Sbjct 39012 CCTCCTCTCAGACGCAGCACCAGATGGAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAC 39071 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||||||| |||||||| || || || ||||||||||||| ||| Sbjct 39072 AGTGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATCAGACGCTGCTGGTCGGGTGGA 39131 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || |||||| ||| || |||| || | | ||||| || | |||||| Sbjct 39132 ATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACT 39191 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || | ||||| |||||||| ||||| Sbjct 39192 TCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 39238 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | |||||||||||| |||| |||| ||||| || || ||||| |||| | Sbjct 38784 CCGCCTCTCAGACGCAACACCAAGTGCAGTGTGGATTCCTTCTGGATGTTGTAGTCAGAC 38843 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| ||||| || || || |||||||| || | || Sbjct 38844 AGTGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGGGGA 38903 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || ||||||||| |||||| || | | | | ||||| || | ||| || Sbjct 38904 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGTTCAACC 38963 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || | ||||| ||||| || ||||| Sbjct 38964 TCCAATGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 39010 >seq1 Length=18507834 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| |||| | ||| |||||| ||||||||||||||||||||| |||||||||| Sbjct 2803325 TTCCTCCCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 2803384 Query 57064 CTATACTACCGAGGATT 57080 ||||||||||||||||| Sbjct 2803385 CTATACTACCGAGGATT 2803401 >seq3244 Length=6917 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 2511 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2570 Query 57059 CACCACTATACTACCGAGGATT 57080 ||||||||||||| |||||||| Sbjct 2571 CACCACTATACTAACGAGGATT 2592 >seq479 Length=88402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||||| | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 72734 AAAATGATCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 72675 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 72674 AACCACTATACTAACGAGGATT 72653 >seq67 Length=4186129 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3369653 TCTCCCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3369594 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 3369593 ATACTACCGAGGA 3369581 >seq9971 Length=1502 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 1295 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1354 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 1355 AACCACTATACTAACGAGGATT 1376 >seq4167 Length=5225 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 2127 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2068 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 2067 AACCACTATACTAACGAGGATT 2046 >seq3104 Length=7282 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 2051 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2110 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 2111 AACCACTATACTAACGAGGATT 2132 >seq1894 Length=11518 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 8692 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 8751 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 8752 AACCACTATACTAACGAGGATT 8773 >seq567 Length=63060 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 13023 AAAATAATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 12964 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 12963 AACCACTATACTAACGAGGATT 12942 >seq518 Length=74296 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 44909 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 44968 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 44969 AACCACTATACTAACGAGGATT 44990 >seq325 Length=287866 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 269950 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 270009 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 270010 AACCACTATACTAACGAGGATT 270031 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| | | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 27468 AAAATAATCTCCCCATCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGTGATACT 27527 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 27528 AACCACTATACTAACGAGGATT 27549 >seq290 Length=389319 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||||| | | ||| |||||| |||||||| |||||||||||| ||||| Sbjct 29280 AAAATGATCTCCTCGTCGGGGAATTGAACCCCGGTCTCCCACGTGACAGGCGGGGATACT 29221 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 29220 AACCACTATACTAACGAGGATT 29199 >seq3059 Length=7379 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 5381 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 5440 Query 57059 CACCACTATACTACCGAGGAT 57079 |||||||||||| ||||||| Sbjct 5441 AACCACTATACTAACGAGGAT 5461 >seq2299 Length=9690 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 6936 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 6995 Query 57059 CACCACTATACTACCGAGGAT 57079 |||||||||||| ||||||| Sbjct 6996 AACCACTATACTAACGAGGAT 7016 >seq14419 Length=1184 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 279 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 338 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 339 AACCACTATACTAACGAGGATT 360 >seq2771 Length=8156 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| | ||||||| |||||||||||| ||||| Sbjct 7047 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGATCTCCCGAGTGACAGGCGGAGATACT 7106 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 7107 GACCACTATACTAACGAGGATT 7128 >seq2183 Length=10194 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 5542 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 5483 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 5482 AACCACTATACTAACGAGGATT 5461 >seq1809 Length=11981 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||| ||||||||||||||||| ||||| Sbjct 3124 AAAATGATCTCCCCGTCGGGGAATTGAACCCCGGTATCCCGCGTGACAGGCGGGGATACT 3183 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 3184 AACCACTATACTAACGAGGATT 3205 >seq1714 Length=12628 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 852 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 793 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 792 GACCACTATACTAACGAGGATT 771 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 12025 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 12084 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 12085 GACCACTATACTAACGAGGATT 12106 >seq687 Length=44948 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 775 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 716 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 715 GACCACTATACTAACGAGGATT 694 >seq131 Length=2021475 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 242815 AAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 242874 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 242875 GACCACTATACTAACGAGGATT 242896 >seq829 Length=30080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct 2300 AATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTAACGAGGAT 2359 Query 57080 T 57080 | Sbjct 2360 T 2360 >seq360 Length=199920 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct 52883 AATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTAACGAGGAT 52942 Query 57080 T 57080 | Sbjct 52943 T 52943 >seq188 Length=996013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| || ||||||||||||||||| ||||| Sbjct 41845 AAAATGATCTCCCCGTCGGGGAATTGAACCCGCGTTTCCCGCGTGACAGGCGGGGATACT 41786 Query 57059 CACCACTATACTACCGAGGATTGA 57082 ||| ||||||||| |||||||||| Sbjct 41785 CACTACTATACTAACGAGGATTGA 41762 >seq1088 Length=20193 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 6638 AAAATAACCTCCCCGTCGGGGAATTGAACCC-GGTCTCCCGCGTGACAGGCGGGGATACT 6580 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| |||||||| Sbjct 6579 AACCACTATACTAACGAGGATT 6558 >seq804 Length=31283 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 19235 AAAATAATCTCCCCGTCGGGGAATTGAACCC-GGTCTCCCGCGTGACAGGCGGGGATACT 19293 Query 57059 CACCACTATACTACCGAGGATT 57080 |||||||||||| | |||||| Sbjct 19294 AACCACTATACTAACAAGGATT 19315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543068821447360