Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 1e-14 seq51 91.5 2e-13 >seq9 Length=12614711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 153287 AGGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGC 153346 |||||| || || |||||||| ||||| || ||||| ||||| | || || || ||||| Sbjct 10264805 AGGTGTATTGCACACAAAATTCTGGATTGTAGATAAGAAACACATTTACATCGGTAGTGC 10264746 Query 153347 TAATATGGATTGGAGATCACTAACTCAAGTAAAAGAA 153383 |||||||||||||||||||| ||||| || | |||| Sbjct 10264745 GAATATGGATTGGAGATCACTCACTCAGGTGAGAGAA 10264709 >seq51 Length=4861936 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 || ||||||||||| || | ||||||||| |||||||||||||| || ||||| || || Sbjct 4860911 ATGTAAGTATCAATAAGAAGACTATACATCTCAGAGTGAATATTCTCCATAGCAATTTGG 4860970 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543 |||||||| ||||| | ||| || | | |||||| || Sbjct 4860971 AAACCATAGAAACAGCGAGCCTCGGTGATTTGAACTTC 4861008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592159806432160