Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq121 93.3 8e-14 >seq121 Length=2118225 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || || || |||||||| ||||||||||| ||||| || |||||| || || || || Sbjct 638804 GGAGACCGACTGGTAGCTTTTGCTGCTGTTGAGGGGATATTTTTCTCAGGATCATTCGCT 638863 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||| || ||||| ||| | ||| ||||| || || ||||||||| ||||| Sbjct 638864 GCCATTTTTTGGCTGAAGAAACGAGGGCTAATGCCAGGCCTTACCTTTTCCAATGAGCTG 638923 Query 25993 ATCAGCAGGGACGA 26006 ||||||||||| || Sbjct 638924 ATCAGCAGGGATGA 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928598609685760