Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq224 84.2 3e-11 >seq224 Length=674359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 48076 CCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTA 48135 ||||| || || || |||||||| || || ||||| ||||| || | || ||||| || Sbjct 438103 CCATATGGTGATCGAGGATAGAACGGGGTCGTCTCCGTCTGCGGGATTTCCTGCACTTTG 438044 Query 48136 CCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 ||| | |||||||||||||||||||| |||| Sbjct 438043 CCAAATAGTTCACTGGTGGATGCTTGGTAGA 438013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665318010709280