Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11]
21,204 sequences; 974,498,586 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq94 87.8 1e-12
seq47 87.8 1e-12
>seq94
Length=3237593
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708
|| ||||||||| | ||| || |||||| | || || | ||| || || |||||||||
Sbjct 38461 GACAAAGAAGGCATTCCCCCCGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAG 38402
Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| | ||| || | |||||||||||||| || ||||| || ||||| ||||| ||
Sbjct 38401 GATGGTCGCACACTGTCTGACTACAACATTCAGAAAGAGTCCACACTGCACTTGGTGCTG 38342
Query 107769 AGATTGCGAGGGGGAAAT 107786
| || ||||||| |||
Sbjct 38341 CGTCTGAGAGGGGGCAAT 38324
>seq47
Length=5048387
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 107547 AGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACG 107606
|| || |||||||| || ||||| || || || || ||||| ||||||||| | |||
Sbjct 1632906 AGTTTCAAAATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATTACCCTTGAAGTT 1632847
Query 107607 GAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCC 107666
|| | | || || | | | || ||| ||||| || ||||||||| | ||
Sbjct 1632846 GAACCAAGTGACACCATTGAGAACGTCAAAGCCAAGATCCAGGACAAAGAAGGCATTCCT 1632787
Query 107667 GTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCG 107726
||||| ||| | || || | ||| || || ||| |||| || | | |||| | |
Sbjct 1632786 CCTGATCAACAGCGTCTCATCTTTGCTGGCAAGCAGTTGGAAGATGGCCGAACACTATCT 1632727
Query 107727 GACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||||||||| || || || || || ||| ||||| || || | || || ||
Sbjct 1632726 GACTACAACATTCAGAAAGAATCCACATTACACTTGGTGCTGCGACTCCGTGGTGG 1632671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398773720761556
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |