Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq51 84.2 2e-11 >seq51 Length=4861936 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || ||||| | ||| | ||||| || | || | ||||| Sbjct 4638899 AGCATCTGGGGCCCAACTTGTGATGGGCTTGATCGTATTGTAGAGTGTTGCAACTTGCCA 4638958 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 |||||||| || || |||||| | | ||||| |||||||| ||||||| | | | | || Sbjct 4638959 GAGCTTCAGGTTGGAGACTGGATGGTGTTTGAGAACATGGGTGCTTACACCCTTG-CTGC 4639017 Query 21245 T-CTTCAACCTTTAACGGCTTCC 21266 | | ||||| ||||| ||||||| Sbjct 4639018 TGCCTCAACATTTAATGGCTTCC 4639040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463422737238720