Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq135 123 5e-23 >seq135 Length=1930211 Score = 123 bits (136), Expect = 5e-23 Identities = 132/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGA-TAGAATACTTAGATACAG 58427 |||||| ||| || |||||||||||| | || ||||||| | || || | || |||| Sbjct 82889 GATAGCGTCAGCCTTGTGGTGGTACTATGTCTC-AAAGGGAGTTGAGTATATGGACACAG 82831 Query 58428 TGTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATT 58487 |||||||||| | ||||| || ||||| || || ||||| || || || |||||||||| Sbjct 82830 TGTTTTTCATCTTGAGGAAGAAATTTAACCAGGTCAGCTTCCTGCATGTGTATCATCATT 82771 Query 58488 TTACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | || |||||||| | | ||| | || || |||||| | ||||||||||| Sbjct 82770 TCACGATGTTTACCCTGTGGTGGATTGGAATCAAATGGGTCGCAGGAGGTCA 82719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903171750861440