Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3420 230 7e-55 seq44 224 3e-53 seq47 188 2e-42 seq94 178 4e-39 seq258 98.7 3e-15 seq9 86.0 2e-11 >seq3420 Length=6548 Score = 230 bits (254), Expect = 7e-55 Identities = 769/1185 (65%), Gaps = 20/1185 (2%) Strand=Plus/Minus Query 349475 GACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC 349534 ||||| | ||||| | || ||||| || || ||||| |||| || || || | Sbjct 5147 GACGGGGGAAAACCCAAAATCGAGGTGGAGTACAAAGGAGAACTGAAGAGCTTCTTTGCT 5088 Query 349535 GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGT 349594 || || || ||||| ||||| | ||| ||||| || ||||| || || ||||| || Sbjct 5087 GAGGAGATCTCATCCATGGTGCTGACTAAGATGAAAGAGATTGCAGAGGCTTATTTGGGC 5028 Query 349595 GAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCT 349654 || || | | ||||||| ||||| || || || || ||||||||| |||| | Sbjct 5027 ACCACTGTGAATAATGCTGTCATTACGGTTCCTGCTTACTTTAATGATAGCCAGAGACAA 4968 Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 || || || |||||||| ||| | || |||||||| || || || || |||||||| Sbjct 4967 GCCACCAAGGATGCTGGTGCCATCTCTGGCTTAAATGTACTGAGGATCATCAATGAACCA 4908 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA----GaaaaaaaTAT 349770 ||||| || || ||||| || || || || ||| || || | || | ||| | Sbjct 4907 ACTGCAGCTGCTATTGCTTACGGCCTGGACCAAA---GT-ACAACTGGTGAGCACAATGT 4852 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || || ||||| | || ||||| ||||||||||| || | | || |||| || || Sbjct 4851 GCTGATCTTTGACCTGGGGGGTGGGACTTTTGATGTTTCTATCTTGACCATTGAGGAAGG 4792 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | || || || ||| | || ||||| || || || || || || ||||||||||| | Sbjct 4791 GGTCTTCGAGGTCAAATCCACGGCTGGGGACACTCACCTGGGAGGGGAAGATTTTGACAG 4732 Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGA 349950 || || || ||||| | | || || || || || ||| | ||||| | | Sbjct 4731 CCGCCTGGTGAGCCATTTCATCGAGGAGTTCAAACGGAAATTTAAGAAGGATATCACACA 4672 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || |||| |||| || | | || || ||||| ||||| ||| | || | || Sbjct 4671 AAACAAGCGAGCGGTGCGGCGTTTGCGCACCGCTTGTGAGCGTGCCAAGAGGACCCTGTC 4612 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | || || || ||||| ||||| || || ||| || | ||||||| | Sbjct 4611 TTCCAGCACGCAGGCCAGCATTGAGATTGACTCCCTGTTTGAAGGGATTGATTTCTACAC 4552 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATG 350128 || || || | ||||||||||| ||| || ||| || || || | ||| || Sbjct 4551 CTCCATCACCAGGGCTCGGTTTGAGGAA--CTGAATGGTGACCTGTTCCGGAGTACACTG 4494 Query 350129 GATCCTGTGGAAAAAGTATTAAAAGA-TGCAAAAATGTCCAAAAATCAGATTGATGAAGT 350187 || || || || |||| | || |||| || || || |||||| | || | Sbjct 4493 GAACCCGTTGAGAAAGCTCTGCGGGATTGCAGAATTG-AGAAGCTGCAGATTAAGGACAT 4435 Query 350188 AGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTT 350247 || | || || || || || | || || ||| | || | | || || || || Sbjct 4434 TGTCCTTGTGGGAGGCTCCACCAGGATCCCCAAAATCCAGAAAATGCTTCAAGACTTCTT 4375 Query 350248 TAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGC 350307 | ||| ||||| | || | || |||||||||||||| || || ||||| || || Sbjct 4374 TGGTGGGAAAGAGCTGAATAAAAGCATCAATCCAGATGAAGCCGTAGCGTATGGAGCAGC 4315 Query 350308 TGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACT 350367 ||| |||||| | || || |||| ||||| | || | | ||| | || ||||| Sbjct 4314 TGTCCAGGCAGCCATCCTAACTGGTGATAAGTCTGAGAACGTGCAGGATTTGTTGCTACT 4255 Query 350368 AGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 ||||| |||| || || ||||| | ||||| |||||| || ||||| | ||| || Sbjct 4254 GGATGTCGCTCCTCTGTCTCTTGGGATTGAAACGGCTGGTGGGGTGATGACCGCTCTGAT 4195 Query 350428 TCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCA--GAT 350485 | || | || | || |||| | ||||| ||||| || || || || Sbjct 4194 CAAACGCAACACCACCATCCCCACAAGGCAAACCCAA--GTTTTCACCACTTACACTGAA 4137 Query 350486 AATC-AGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAA 350544 || | ||| || | | | ||||||| |||||||| ||| | | || |||||||| Sbjct 4136 AACCAAGCTAGTGTTCTC-GTTCAAGTCTTTGAAGGCGAAAGGTCGATGACCAAAGATAA 4078 Query 350545 TAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCA 350604 || ||||| | ||| | | ||| || | |||| || ||||||| || || Sbjct 4077 CAACCTTCTTGGCAAGTTTGACTTGTCTGATATCCGACCAGCTCCCCGAGGAGTGCCGCA 4018 Query 350605 GATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 |||||| ||| ||||||||| ||| | || || || | ||||| Sbjct 4017 GATTGAGGTCATTTTCGATATCGATGCCAACGGAATCCTGAATGT 3973 >seq44 Length=5213970 Score = 224 bits (248), Expect = 3e-53 Identities = 379/546 (69%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| |||| | ||||||||||| | ||||||||||| ||||| || || | | || Sbjct 4130157 GAAAGAAATGTACTTATTTTTGACCTGGGTGGTGGTACCTTTGACGTTTCCATCTTGACC 4130098 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| ||||| |||||||| || |||| |||||||| || ||||||||||| ||| Sbjct 4130097 ATTGAAGATGGAATCTTTGAAGTGAAGTCAACAGCTGGTGACACTCATCTTGGTGGTGAA 4130038 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATT 349939 || ||||| | ||| | || || || || ||||| || || || ||| | Sbjct 4130037 GACTTTGACAGTCGAATGGTCAACCACTTCATTGCTGAATTCAAACGCAAATATAAGAAA 4129978 Query 349940 GATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAG 349999 ||| || | |||||| ||||| | || || || | || || ||||||||||| ||| Sbjct 4129977 GATGTTAGCGATAATAAGAGAGCTGTCCGCCGTCTCCGCACCGCTTGTGAACGTGCAAAG 4129918 Query 350000 CGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAA 350059 ||| || | ||||| | ||| ||| | |||||| || ||||| ||| ||| || Sbjct 4129917 CGTACCCTGTCATCGAGTACGCAAGCAAGTATTGAGATCGATTCCCTTTATGAGGGAGTT 4129858 Query 350060 GATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGA 350119 ||||||| | || || || | || || |||||||| | | || || || | Sbjct 4129857 GATTTCTACACCTCAATCACCAGGGCACGTTTTGAAGAGCTCAATGCTGACCTGTTCCGT 4129798 Query 350120 GCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT 350179 | ||| | |||||||| || ||| || ||||| ||| | ||| |||||| Sbjct 4129797 GGCACACTAGATCCTGTAGAGAAATCCTTGCGTGATGCCAAACTTGACAAGGCTCAGATC 4129738 Query 350180 GATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCT 350239 | || | || | ||||||||||| || |||||||| ||| | || | ||||| Sbjct 4129737 CACGACATTGTGCTCGTTGGTGGTTCCACTCGTATTCCCAAAATCCAGAAATTACTGCAG 4129678 Query 350240 GAGTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATA 350298 || || || |||||||||||| | ||| | || ||||| ||||| ||||||||||| Sbjct 4129677 GACTTCTTCAATGGCAAAGAATTGAATAAGAGC-ATCAATCCTGATGAGGCTGTTGCATA 4129619 Query 350299 TGGTGC 350304 |||||| Sbjct 4129618 TGGTGC 4129613 Score = 206 bits (228), Expect = 8e-48 Identities = 375/546 (69%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| |||| | ||||||||||| | ||||||||||| |||||||| || | || || Sbjct 4119081 GAAAGAAATGTACTTATTTTTGACCTGGGTGGTGGTACCTTTGATGTTTCCATCCTGACC 4119022 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| ||||| |||||||| || |||| |||||||| || ||||||||||| ||| Sbjct 4119021 ATTGAAGATGGAATCTTTGAAGTGAAGTCAACAGCTGGTGACACTCATCTTGGTGGTGAA 4118962 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATT 349939 || ||||| | || | || || || ||| ||||| || || || ||| | Sbjct 4118961 GACTTTGACAGCCGAATGGTCAATCACTTCATTACTGAATTCAAACGCAAATATAAGAAG 4118902 Query 349940 GATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAG 349999 || ||| || || ||||| | || || || | || || || |||||||| ||| Sbjct 4118901 GACATTACCGACAACAAGAGAGCTGTCCGCCGTCTCCGCACCGCTTGCGAACGTGCAAAG 4118842 Query 350000 CGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAA 350059 ||| || | ||||| | ||| ||| | |||||| || ||||| || ||| || Sbjct 4118841 CGTACCCTGTCATCGAGTACGCAAGCAAGTATTGAGATCGATTCCCTATATGAGGGAGTT 4118782 Query 350060 GATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGA 350119 ||||||| | || || || | || || |||||||| | | || || || | Sbjct 4118781 GATTTCTACACCTCAATCACCAGGGCACGTTTTGAAGAGCTCAATGCTGACCTGTTCCGT 4118722 Query 350120 GCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT 350179 | ||| | |||||||| || ||| || ||||| ||| | ||| |||||| Sbjct 4118721 GGCACACTAGATCCTGTAGAGAAATCCTTGCGTGATGCCAAACTTGACAAGGCTCAGATC 4118662 Query 350180 GATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCT 350239 | || | || | ||||||||||| || |||||||| ||| | || | || || Sbjct 4118661 CACGACATTGTGCTCGTTGGTGGTTCCACTCGTATTCCCAAAATCCAGAAATTGCTGCAG 4118602 Query 350240 GAGTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATA 350298 || || || |||||||||||| | ||| | || ||||| ||||| ||||||||||| Sbjct 4118601 GACTTCTTCAATGGCAAAGAATTGAATAAGAGC-ATCAATCCTGATGAGGCTGTTGCATA 4118543 Query 350299 TGGTGC 350304 |||||| Sbjct 4118542 TGGTGC 4118537 Score = 167 bits (184), Expect = 7e-36 Identities = 357/531 (67%), Gaps = 2/531 (0%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAA 183321 ||||||||||||||||||| ||||| || || || | |||||||||||||| | Sbjct 4118535 CTGCACCATATGCAACAGCCTCATCAGGATTGATGCTCTTATTCAATTCTTTGCCATTGA 4118594 Query 183322 AAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTA 183381 | || || |||| || || ||||| ||||| | ||| |||||||| || | || | Sbjct 4118595 AGAAGTCCTGCAGCAATTTCTGGATTTTGGGAATACGAGTGGAACCACCAACGAGCACAA 4118654 Query 183382 CTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCC 183440 || | ||| | | | || | | |||| | ||| || ||| || ||||| || Sbjct 4118655 TGTCGTGGATCTGAGCCTTGTCAAGTTTG-GCATCACGCAAGGATTTCTCTACAGGATCT 4118713 Query 183441 ATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaa 183500 | || | || | || | | |||||| || | ||| || || | || | Sbjct 4118714 AGTGTGCCACGGAACAGGTCAGCATTGAGCTCTTCAAAACGTGCCCTGGTGATTGAGGTG 4118773 Query 183501 aaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGAT 183560 | || |||| || | ||||| |||||| || ||||| || ||| ||| ||||| Sbjct 4118774 TAGAAATCAACTCCCTCATATAGGGAATCGATCTCAATACTTGCTTGCGTACTCGATGAC 4118833 Query 183561 AATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCT 183620 | || | || || ||||| || || || | || || || | | ||| || || Sbjct 4118834 AGGGTACGCTTTGCACGTTCGCAAGCGGTGCGGAGACGGCGGACAGCTCTCTTGTTGTCG 4118893 Query 183621 GTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTA 183680 ||||| || | |||| ||| | ||| ||||||||||| || || | | | || | Sbjct 4118894 GTAATGTCCTTCTTATATTTGCGTTTGAATTCAGTAATGAAGTGATTGACCATTCGGCTG 4118953 Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||| ||||||||||| | ||| || || ||||| || | || |||||||| ||||| Sbjct 4118954 TCAAAGTCTTCACCACCAAGATGAGTGTCACCAGCTGTTGACTTCACTTCAAAGATTCCA 4119013 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 |||||||| | | || || |||||||| ||||||||||||| |||||| Sbjct 4119014 TCTTCAATGGTCAGGATGGAAACATCAAAGGTACCACCACCCAGGTCAAAA 4119064 Score = 167 bits (184), Expect = 7e-36 Identities = 357/531 (67%), Gaps = 2/531 (0%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAA 183321 ||||||||||||||||||| ||||| || || || | |||||||||||||| | Sbjct 4129611 CTGCACCATATGCAACAGCCTCATCAGGATTGATGCTCTTATTCAATTCTTTGCCATTGA 4129670 Query 183322 AAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTA 183381 | || || || | || || ||||| ||||| | ||| |||||||| || | || | Sbjct 4129671 AGAAGTCCTGCAGTAATTTCTGGATTTTGGGAATACGAGTGGAACCACCAACGAGCACAA 4129730 Query 183382 CTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCC 183440 || | ||| | | | || | | |||| | ||| || ||| || ||||| || Sbjct 4129731 TGTCGTGGATCTGAGCCTTGTCAAGTTTG-GCATCACGCAAGGATTTCTCTACAGGATCT 4129789 Query 183441 ATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaa 183500 | || | || | || | | |||||| || | ||| || || | || | Sbjct 4129790 AGTGTGCCACGGAACAGGTCAGCATTGAGCTCTTCAAAACGTGCCCTGGTGATTGAGGTG 4129849 Query 183501 aaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGAT 183560 | || |||| || | ||| | |||||| || ||||| || ||| ||| ||||| Sbjct 4129850 TAGAAATCAACTCCCTCATAAAGGGAATCGATCTCAATACTTGCTTGCGTACTCGATGAC 4129909 Query 183561 AATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCT 183620 | || | || || |||||||| || || | || || || | | ||| |||||| Sbjct 4129910 AGGGTACGCTTTGCACGTTCACAAGCGGTGCGGAGACGGCGGACAGCTCTCTTATTATCG 4129969 Query 183621 GTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTA 183680 ||| ||||| |||| ||| | ||| ||||||| ||| || || | | | || | Sbjct 4129970 CTAACATCTTTCTTATATTTGCGTTTGAATTCAGCAATGAAGTGGTTGACCATTCGACTG 4130029 Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||| ||||||||||| | ||| || || ||||| || | || |||||||| ||||| Sbjct 4130030 TCAAAGTCTTCACCACCAAGATGAGTGTCACCAGCTGTTGACTTCACTTCAAAGATTCCA 4130089 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 |||||||| | || || || || ||||| ||||||||||||| |||||| Sbjct 4130090 TCTTCAATGGTCAAGATGGAAACGTCAAAGGTACCACCACCCAGGTCAAAA 4130140 >seq47 Length=5048387 Score = 188 bits (208), Expect = 2e-42 Identities = 181/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || || || | || | || || ||||| ||||| || || || Sbjct 1632667 CATACCACCACGGAGTCGCAGCACCAAGTGTAATGTGGATTCTTTCTGAATGTTGTAGTC 1632726 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| |||||| |||||||| | || || ||||||||||| ||||| || |||||||| Sbjct 1632727 AGATAGTGTTCGGCCATCTTCCAACTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGG 1632786 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| |||||||| ||||| || || ||||| || || ||||| | ||| |||||| Sbjct 1632787 AGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTGACGTTCTCAATGGTGTCACTTGGTTC 1632846 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||||||| |||| ||||| || || | || || ||||| ||||||||| Sbjct 1632847 AACTTCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATT 1632898 Score = 187 bits (206), Expect = 8e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || || || | || | || || ||||| ||||| || || || Sbjct 1632439 CATACCACCACGGAGTCGCAGCACCAAGTGTAATGTGGATTCTTTCTGAATGTTGTAGTC 1632498 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| |||||| |||||||| | || || ||||||||||| ||||| || |||||||| Sbjct 1632499 AGATAGTGTTCGGCCATCTTCCAACTGCTTGCCAGCAAAGATGAGACGCTGTTGATCAGG 1632558 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| |||||||| ||||| || || ||||| || || ||||| | ||| |||||| Sbjct 1632559 AGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTGACGTTCTCAATGGTGTCACTTGGTTC 1632618 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| |||| ||||| || || | || || ||||| |||||||| Sbjct 1632619 AACTTCAAGGGTAATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1632669 Score = 176 bits (194), Expect = 1e-38 Identities = 157/197 (80%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || || ||||| ||||| || || ||||||| |||||| |||||||| | || || ||| Sbjct 1632245 GTGGATTCTTTCTGAATGTTGTAGTCAGATAGTGTTCGGCCATCTTCCAACTGCTTGCCA 1632304 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 |||||||| ||||| || |||||||||||||| |||||||| ||||| || || ||||| Sbjct 1632305 GCAAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTG 1632364 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 || || ||||| | ||| ||||||||||||||| |||| ||||| || || | || Sbjct 1632365 ACGTTCTCAATGGTGTCACTTGGTTCAACTTCAAGGGTAATGGTCTTGCCAGTCAAGGTC 1632424 Query 140721 TTTACAAAAATCTGCAT 140737 || ||||| |||||||| Sbjct 1632425 TTCACAAAGATCTGCAT 1632441 >seq94 Length=3237593 Score = 178 bits (196), Expect = 4e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||||||||| |||||||| || ||||| || || || | ||| || || ||| Sbjct 39483 AGCACCAGATGAAGAGTGGACTCTTTCTGGATATTGTAGTCTGACAGTGTGCGGCCTTCT 39542 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||| Sbjct 39543 TCCAGCTGTTTGCCAGCGAAGATCAGACGCTGTTGGTCGGGTGGAATGCCTTCTTTGTCC 39602 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || ||||| ||||| | ||| ||||| || || ||||||| ||| Sbjct 39603 TGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCCAGTGTAATAGTC 39662 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || ||||| ||||||||||||||| Sbjct 39663 TTGCCAGTCAGGGTTTTCACAAAAATCTGCATT 39695 Score = 167 bits (184), Expect = 7e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| |||||||| ||||| || || || || || || | ||| || ||||| Sbjct 39027 AGCACCAGATGGAGAGTAGATTCTTTCTGGATGTTGTAGTCTGACAGTGTGCGGCCATCC 39086 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| ||||||||||| ||||| ||||| || || ||||| |||||||| ||| Sbjct 39087 TCTAGCTGTTTACCAGCAAAGATCAGACGCTGCTGGTCGGGTGGAATGCCTTCTTTGTCC 39146 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || ||||| ||||| | ||| ||||| ||||| ||||| | ||| Sbjct 39147 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGTGTGATGGTC 39206 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | || || ||||| |||||||| Sbjct 39207 TTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 39238 Score = 161 bits (178), Expect = 3e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| ||||| || ||||| || || ||||| || |||| || || |||||| Sbjct 38571 AGGACCAGATGCAGAGTGGATTCTTTCTGGATGTTATAGTCTGATAGGGTACGGCCATCT 38630 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || |||||||| ||||| || ||||| || || || || ||||| ||| Sbjct 38631 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATACCCTCTTTGTCC 38690 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || ||||| ||||| | ||| ||||| ||||| ||||| | ||| Sbjct 38691 TGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACTTCCAGTGTGATGGTC 38750 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| |||||||||||||| Sbjct 38751 TTGCCAGTCAGGGTTTTGACAAAAATCTGCAT 38782 Score = 156 bits (172), Expect = 1e-32 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || |||||||| ||||| || || ||||| | ||| || ||||| || | Sbjct 38348 CAAG-TGCAGTGTGGACTCTTTCTGAATGTTGTAGTCAGACAGTGTGCGACCATCCTCCA 38406 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| ||||| ||||| || || ||||| |||||||| ||||| | Sbjct 38407 GCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCCTGGA 38466 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || || ||||| | ||| || || || |||||||| | ||||| | Sbjct 38467 TTTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCTACCTCAAGTGTGATGGTCTTGC 38526 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || ||||| |||||||| Sbjct 38527 CGGTCAGGGTCTTCACAAAGATCTGCAT 38554 Score = 141 bits (156), Expect = 3e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || || || || || || ||||| | ||| || |||||||||| Sbjct 38804 CAAG-TGCAGTGTGGATTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCTTCAA 38862 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || |||||||| || ||||| |||||||| || ||||| ||||| || ||||| | Sbjct 38863 GCTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 38922 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || || ||||| | ||| |||||||| || | ||| | ||||| | Sbjct 38923 TTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGTTCAACCTCCAATGTGATGGTCTTGC 38982 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || |||||||||||||| Sbjct 38983 CAGTCAAGGTCTTGACAAAAATCTGCAT 39010 >seq258 Length=490067 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/164 (74%), Gaps = 5/164 (3%) Strand=Plus/Plus Query 349248 AAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACG 349307 |||||| ||||| ||||| ||||| ||||| || || ||| | | || ||||| || | Sbjct 376420 AAAATGGGCGTGTGGAAATCATTGCCAATGACCAGGGCAACCGGATCACTCCATCTTATG 376479 Query 349308 TTGCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CT 349363 | || || || ||| |||||| ||||||||||| ||||||| || | ||||| || Sbjct 376480 TGGCCTTCACAAGTGAAGGAGAGCGTTTGATTGGTGATGCTGCAAAGAA-CCAGCTGACT 376538 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 | || ||| | || || || |||||||| || || |||||||| Sbjct 376539 TCAAACCCAGAGAACACCGTCTTTGATGCCAAACGTCTTATTGG 376582 >seq9 Length=12614711 Score = 86.0 bits (94), Expect = 2e-11 Identities = 66/76 (87%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 235888 AGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAA 235947 ||||||| ||| |||| ||||||| |||||||||||||||||||||||| ||||||| | Sbjct 2182520 AGGGGGAATTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTAGCGGGATCGA 2182579 Query 235948 AACCCAGCA-TCTCCA 235962 | ||| ||| |||||| Sbjct 2182580 AGCCC-GCATTCTCCA 2182594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514842741366812