Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq51 93.3 5e-14 >seq51 Length=4861936 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 |||||||| ||| || ||||||||||| |||||||| || ||| ||||||||||||| | Sbjct 4860401 GCTTTTGC-TGCTGTAGAAGGAATCTTTTTCTCTGGATCATTCGCTGCTATTTTCTGGTT 4860343 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 || ||||| || || ||||| ||| ||| ||||| || || ||||| Sbjct 4860342 GAAGAAGCGAGGTCTGATGCCTGGCTTGACCTTCTCTAATGAACTGAT 4860295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548379413501760