Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq135 104 3e-17 >seq135 Length=1930211 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| ||||||||||| || | | |||| || || | || ||| | || || | Sbjct 82888 ATAGCGTCAGCCTTGTGGTGGTACTATGTCTCAAAGGGAGTTGAGTATATGGACACAGTG 82829 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 || ||||| |||| |||||||||||||| || ||||| |||| || || || ||||| Sbjct 82828 TTTTTCATCTTGAGGAAGAAATTTAACCAGGTCAGCTTCCTGCATGTGTATCATCATTTC 82769 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || |||||||| | | ||||| || || |||||| | |||||||| || Sbjct 82768 ACGATGTTTACCCTGTGGTGGATTGGAATCAAATGGGTCGCAGGAGGTCA 82719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603020926928960