Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq79 84.2 2e-11 >seq79 Length=3751688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/145 (74%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 3251 GATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGT 3310 || ||||| |||||||||||| | |||||||| ||||| || |||||||| | || || Sbjct 2457027 GAGGAGCTGTTCCGAGATGGGATCAACTGGGGCCGCATCGTGGCTTTCTTCGTCTTCGGC 2456968 Query 3311 GGTGTTATGTGTGTGGAAAGCGTCAATA-GAGG--CATACCCTCCCTCGTTGACAACATT 3367 || |||| ||||| ||| ||| | |||| ||| || | || || |||| ||| Sbjct 2456967 GGCACCTTGTGCGTGGAGAGCTGCAAGAGGAGGGACATGGCCCCGCTGGTGGACAGCATC 2456908 Query 3368 GCCGCGTGGATGACAGACCAGCTGG 3392 ||||| |||||||| | | | |||| Sbjct 2456907 GCCGCCTGGATGACCGCCTACCTGG 2456883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414369689351056