Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callorhinchus_20milii_20[refseq_20GCF_5F000165045.1_202013-12-11] 21,204 sequences; 974,498,586 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq84 84.2 8e-12 >seq84 Length=3616636 Score = 84.2 bits (92), Expect = 8e-12 Identities = 106/140 (76%), Gaps = 8/140 (6%) Strand=Plus/Plus Query 52120 CTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTCGTGCCATTTG 52178 |||||||||| | || | || ||||| ||| || || || | || || ||||| || Sbjct 1912628 CTCCCTGCCACGCTCTCTGTCAGTTCTACGTA-CTAAATGGGGAACTGTCCTGCCAACTG 1912686 Query 52179 TATCAGCGGTCTGCCGACATGTT---CTTGGGCGTTCCGTTTAACATTGCCAGCTATTCC 52235 |||||| | || | || |||| ||||| |||||| ||||| ||||||||||||||| Sbjct 1912687 TATCAGAGATCAG--GAGATGTGGGGCTTGG-CGTTCCATTTAATATTGCCAGCTATTCC 1912743 Query 52236 TTGCTGACGCATCTGATTGC 52255 || |||||| || ||||||| Sbjct 1912744 TTACTGACGTATATGATTGC 1912763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190048134302440