Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq272 84.2 2e-11 >seq272 Length=1747054 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||||||||| | | || ||||| || || |||| |||||| | || Sbjct 1531221 ATGGCTCTCCCTCCATGTCATGCACTCTGCCAGTTCTATGTATCAAATGGTGAACTGTCT 1531280 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||| ||||| || ||||| | || || || ||||| |||||| | Sbjct 1531281 TGCCAGCTCTACCAGAGGTCGGGAGACATGGGGTTGGGTGTCCCCTTCAATATTGCTAGT 1531340 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || | | ||||| ||||| | || || | ||||| || || Sbjct 1531341 TACTCTTTACTTACTTACATGATTGCTCACATCACAGGGCTCAA 1531384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399392895315855