Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1120 100 2e-16 seq14380 87.8 1e-12 >seq1120 Length=750286 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| | || | || |||||||| ||||||||||| ||| Sbjct 84345 CCACCACGCAGACGCAGCACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 84404 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| ||||||||| || || || || ||||| ||||| || Sbjct 84405 AGAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGG 84464 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||| | || | || | ||| | | || || Sbjct 84465 ATTCCTTCCTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTATCACTGGGCTCCACC 84524 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||||||||| || || |||||||||||||||||||||||| Sbjct 84525 TCAAGGGTGATGGTTTTACCAGTCAGAGTTTTCACAAAGATCTGCATC 84572 >seq14380 Length=3375 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 34208 ATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGC 34267 ||||||||||| ||||| || | || |||| ||||||||| || || || || ||| Sbjct 1 ATGTTGTAGTCAGACAGAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGC 60 Query 34268 TGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAA 34327 || ||||| || | | ||||| || ||||| ||| | || | || | | Sbjct 61 TGTTGGTCAGGAGGGATTCCTTCCTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTA 120 Query 34328 TCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGC 34387 || | | || || || | ||||||||||| || || ||||||||||||||||||||| Sbjct 121 TCACTGGGCTCCACCTCAAGAGTGATGGTTTTACCAGTCAGAGTTTTCACAAAGATCTGC 180 Query 34388 ATC 34390 ||| Sbjct 181 ATC 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322982151556640