Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq470 102 8e-17 >seq470 Length=1305644 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 16277 TCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCA 16336 ||||| ||||| || | || ||||| ||||||||||| || | ||| ||||||| ||| Sbjct 601046 TCGTTAGAAAAGGTCAACCCAGGCATCAGTCCTCGTTTCTTCAGCCAGAATATAGAAGCA 600987 Query 16337 AATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC 16392 ||||||||||| || || || ||||| || || |||||||| || | |||||||| Sbjct 600986 AATGAACCAGAGAAAAAGATCCCTTCTACAGCTGCAAATGCCACAACACGCTCACC 600931 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563 ||| || ||||| || || | ||| ||||||||||||||||| |||||||| || || || Sbjct 593541 AATGTAGGTATCAATAAGAAGACTGTACATTTCTGAATGAATGTTCTCCATGGCAATTTG 593482 Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC 16602 |||||||| || || | ||||| | |||||| ||||| Sbjct 593481 GAAACCATAGAAACAGCGTGCTTCTGTTATTTGCACTTC 593443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462380074233400