Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq272 96.9 3e-15 >seq272 Length=1747054 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| |||||| |||| || || || | | ||| || || || || || ||| Sbjct 1531381 AGCCCTGTGATGTGAGCAATCATGTAAGTAAGTAAAGAGTAACTAGCAATATTGAAGGGG 1531322 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || | |||||||| | ||||||||||| |||||||| ||||| || || | Sbjct 1531321 ACACCCAACCCCATGTCTCCCGACCTCTGGTAGAGCTGGCAAGACAGTTCACCATTTGAT 1531262 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 || || ||||| || | | ||||| ||||||||||||||| | | ||| || Sbjct 1531261 ACATAGAACTGGCAGAGTGCATGACATGGAGGGAGAGCCATCTGAGGGAGATC 1531209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427657032687120