Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq889 84.2 3e-11 >seq889 Length=882587 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| |||||||| || || ||||| | |||||| Sbjct 337373 CTGTGGTACGCCATCATCGAGTCTCAGACGGAGACTGGCACCCCTTACATGGTTTACAAG 337314 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 || || || | || |||||||| | || |||||||||||||| | || ||| Sbjct 337313 GACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGTAGTAACCTG 337254 Query 97299 TGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 |||||||| |||| |||||| || | ||||||| Sbjct 337253 TGCACGGAGGTTGTCGAGTACACCAGCCAGGACGAG 337218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740847822126440