Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1120 125 5e-24 seq14380 96.9 3e-15 >seq1120 Length=750286 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||||||| ||||| || ||||| || |||||||| || ||| | | | ||||| Sbjct 84363 ACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGTCCATCTTCC 84422 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || |||||||| | |||| ||| |||||||| || |||||||| || || | Sbjct 84423 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTATCCTGA 84482 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| |||| || ||||| || || || || | ||| ||||||||| Sbjct 84483 ATCTTGGCCTTAACATTTTCAATTGTATCACTGGGCTCCACCTCAAGGGTGATGGTTTTA 84542 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||||||||| ||||| || ||||| || Sbjct 84543 CCAGTCAGAGTTTTCACAAAGATCTGCATCTT 84574 >seq14380 Length=3375 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | || |||||||| | |||| ||| |||||||| || |||||||| || Sbjct 28 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTA 87 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || ||| ||| ||| ||| |||| || ||||| || || || || | || ||| Sbjct 88 TCCTGAATCTTGGCCTTAACATTTTCAATTGTATCACTGGGCTCCACCTCAAGAGTGATG 147 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 |||||||| ||||||||||| ||||| || ||||| || Sbjct 148 GTTTTACCAGTCAGAGTTTTCACAAAGATCTGCATCTT 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362078475587679