Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1860 152 8e-33 >seq1860 Length=475879 Score = 152 bits (168), Expect = 8e-33 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| |||| || | |||||||| || |||||||||||||| || || Sbjct 119626 GCCAAGCGTCACCGCAAGGTACTGAGGGATAACATTCAGGGAATCACCAAGCCCGCCATT 119567 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||||| |||||||| || ||| | |||| || || | |||||||| | Sbjct 119566 CGCCGCTTGGCTCGCCGTGGTGGGGTGAAGAGAATCTCCGGGTTAATTTATGAAGAAACC 119507 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || |||||| | || | ||| ||| ||| ||||| || ||||||||| Sbjct 119506 CGCGGCGTCTTGAAGGTGTTTTTGGAGAACGTGATCAGGGATGCAGTCACTTATACCGAG 119447 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| ||||| |||||||| | || ||||| |||||||||| || Sbjct 119446 CACGCCAAGAGAAAGACCGTCACGGCCATGGATGTGGTTTATGCGCTGAAACGTCAGGGA 119387 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || |||||||| ||||| Sbjct 119386 CGTACCCTGTACGGTTTTGGCGGTTAA 119360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79054336428567