Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq889 87.8 3e-12 >seq889 Length=882587 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | |||||| | ||||||| ||| || || || |||| Sbjct 329161 CCTGCTTCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCGTAGTTTGGCTCTGCAATGT 329220 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | || ||||| |||||||| ||||||||| ||||| || || || || ||||| ||||| Sbjct 329221 GGATATTCAGGGACTGGCTCTGGTCGATG-AAGGCACCGCGGTCAGCTGCCATTTTGATG 329279 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 || || ||||| || | ||||| || || ||| ||| Sbjct 329280 ATAGTTTTCTGGGAGACTTCCCATACTGTTTTGTACA 329316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794928391918640