Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq653 176 2e-38 seq432 168 3e-36 seq2637 149 2e-30 seq1512 138 4e-27 seq4093 134 5e-26 seq1120 125 3e-23 seq4389 123 1e-22 seq14380 116 1e-20 seq4189 113 2e-19 seq2 100 1e-15 seq961 87.8 7e-12 >seq653 Length=1088405 Score = 176 bits (194), Expect = 2e-38 Identities = 465/700 (66%), Gaps = 9/700 (1%) Strand=Plus/Plus Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969 |||||| ||||| ||||| || || ||||| | || || || ||||| | ||| |||| Sbjct 715304 AGTAGCTATTGGCATTGACCTGGGCACCACTTACTCCTGCGTGGGTGTCTTCCAGCATGG 715363 Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGTT 451028 || || || || || || |||||||| || | || || | ||||| | || || Sbjct 715364 CAAAGTGGAGATCATCGCCAATGACCAGGGCAACAGGA-CGACTCCCAGCTACGTGGCTT 715422 Query 451029 TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCC 451087 | || || | || || || | || | || || || | | | ||| ||| || Sbjct 715423 TCACTGACACGGAGAGGCTCATTGGAGACGCAGCCAAGAACCA-GGTGGCCCTGAATCCC 715481 Query 451088 AAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTA 451147 | ||||| || | ||||| || | | ||||| | | | ||| ||| || Sbjct 715482 CAGAACACTGTCTTCGATGCCAAGAGACTGATTGGGAGGAAATTTGACGATTCAGTGGTC 715541 Query 451148 CAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 ||| ||| | ||| ||| ||| | | || || | | | | || |||||| | | Sbjct 715542 CAATCAGACATGAAACTCTGGCCTTTTAAAGTCGTGAGTGACACTGGGAAGCCCAAGGTG 715601 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAA-CTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || || | || || || ||| | || | ||| | | || ||||| || || || ||||| Sbjct 715602 CAGGTGGAATACAAGGGAGAAGCGAAGAGCTTCTAC-CCAGAAGAGATCTCTTCCATGGT 715660 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 | || || |||||||| | |||||| || | || |||| |||| || Sbjct 715661 ATTGACCAAGATGAAAGAGATTGCAGAAGCTTACCTGGGCCAAACAGTGGTCAATGCTGT 715720 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 || ||||| ||||| || ||||||||| | || || || || || |||||||| ||| Sbjct 715721 CATCACTGTCCCCGCCTACTTCAATGATTCCCAGCGTCAGGCTACCAAAGATGCTGGAGT 715780 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 || |||||| | ||||| || |||| || ||||| || ||||||||||| | ||||| Sbjct 715781 GATCGCTGGTCTGAATGTCCTGAGAATCATCAATGAGCCCACAGCAGCTGCCATTGCATA 715840 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 |||||| ||| || ||| | | || ||| |||||| | | ||||| | ||||| Sbjct 715841 TGGACT-GGATAA--AAAGGGCAGAGGAGAGCGCAATATTCTTATCTTTGACCTGGGTGG 715897 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 ||| || ||| ||||| || | ||||| ||||| | |||||||||||| | || Sbjct 715898 AGGCACCTTTGACGTCTCTGTCCTCACCATTGATGATGGTATCTTTGAAGTAAAGTCTAC 715957 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||||||||| || || ||||| ||||| |||| ||| Sbjct 715958 AGCTGGTGATACCCACCTGGGAGGAGAAGACTTTGACAAT 715997 >seq432 Length=1393554 Score = 168 bits (186), Expect = 3e-36 Identities = 287/414 (69%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | | || || | || || || || | || | ||| || ||||| Sbjct 1096056 GGAAAGCCCAAGGTGCAGGTGGAGTACAAGGGAGAGATGAAGAGTTTCTACCCAGAAGAG 1095997 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||||| | || || |||||||| || |||||| || | || ||| Sbjct 1095996 ATCTCTTCCATGGTGTTGACCAAGATGAAAGAGACTGCAGAAGCTTACTTGGGCAAACCA 1095937 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | | || || || |||||||| || ||||||||||| | || || || || || Sbjct 1095936 GTGAGCAACGCCGTCATCACTGTTCCAGCCTATTTCAATGACTCCCAGCGCCAGGCTACC 1095877 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| || ||||| | ||||| || |||| || || || || ||||| Sbjct 1095876 AAAGATGCTGGAGTGATCGCTGGGCTGAATGTCCTGAGAATCATCAACGAGCCCACAGCT 1095817 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | ||||||||||| ||| || ||| | | || |||| |||||| | | Sbjct 1095816 GCAGCCATTGCATATGGACT-GGATAA--AAAGGGCAGAGGAGAATGCAATATTCTCATC 1095760 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| || |||||||| || |||| ||||| || | ||||| ||||| | ||| Sbjct 1095759 TTTGACTTGGGTGGAGGTACCTTTGATGTCTCTGTCCTCACTATTGACGATGGCATCTTT 1095700 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||||||||||| || ||| ||||| || || ||||| || || |||| ||| Sbjct 1095699 GAAGTAAAGGCTACAGCTGGCGATACCCACCTGGGAGGAGAGGACTTTGACAAT 1095646 Score = 127 bits (140), Expect = 8e-24 Identities = 245/359 (68%), Gaps = 3/359 (1%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||| || || || ||||| | || || |||||||| || |||||| || | Sbjct 1160622 CCGGAAGAGATCTCTTCCATGGTGTTGACCAAGATGAAAGAGACTGCAGAAGCTTACCTG 1160681 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||||| || |||| || || ||||| ||||| || |||||||| | || || Sbjct 1160682 GGCCAACCAGTGACCAATGCTGTCATCACTGTCCCCGCCTACTTCAATGACTCCCAGCGC 1160741 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || ||||||||||| ||| || ||||| | ||||| || || | || || || Sbjct 1160742 CAGGCTACTAAAGATGCTGGAGTGATCACTGGTCTGAATGTGCTGAGAGTCATCAACGAG 1160801 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || ||||| || || | || |||||| | ||| || ||| | | | || ||| Sbjct 1160802 CCCACAGCTGCAGCCATTGCGTATGGA-TTGGATAA--AAAGGGCGCGGGGGAGTGCAAT 1160858 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 ||| | | |||||| | |||||||| || |||| || | || | ||||| ||| Sbjct 1160859 ATTCTCATCTTTGATCTGGGTGGAGGTACCTTTGATGTCTCCATCCTCACTATTGACGAT 1160918 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || | |||||||||||| | || || ||||| || || ||||| || || |||| Sbjct 1160919 GGCATCTTTGAAGTAAAGTCTACAGCCGGCGATACCCACCTGGGAGGAGAGGACTTTGA 1160977 Score = 116 bits (128), Expect = 1e-20 Identities = 218/318 (69%), Gaps = 3/318 (1%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||| || || || ||||| | || || |||||||| || |||||| || | Sbjct 1154379 CCGGAAGAGATCTCTTCCATGGTGTTGACCAAGATGAAAGAGACTGCAGAAGCTTACCTG 1154320 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||||| || |||| || || ||||| ||||| || |||||||| | || || Sbjct 1154319 GGCCAACCAGTGACCAATGCTGTCATCACTGTCCCCGCCTACTTCAATGACTCCCAGCGC 1154260 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || ||||||||||| ||| || ||||| | ||||| || || | || || || Sbjct 1154259 CAGGCTACTAAAGATGCTGGAGTGATCACTGGTCTGAATGTGCTGAGAGTCATCAACGAG 1154200 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || ||||| || || | || |||||| | ||| || ||| | | | || ||| Sbjct 1154199 CCCACAGCTGCAGCCATTGCGTATGGA-TTGGATAA--AAAGGGCGCGGGGGAGTGCAAT 1154143 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 ||| | | |||||| | |||||||| || |||| || | || | ||||| ||| Sbjct 1154142 ATTCTCATCTTTGATCTGGGTGGAGGTACCTTTGATGTCTCCATCCTCACTATTGACGAT 1154083 Query 451544 GGGGTATTTGAAGTAAAG 451561 || | |||||||||||| Sbjct 1154082 GGCATCTTTGAAGTAAAG 1154065 >seq2637 Length=283777 Score = 149 bits (164), Expect = 2e-30 Identities = 252/363 (69%), Gaps = 3/363 (1%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||| || || |||||||| | || || |||||||| | |||||| || | Sbjct 149023 CCAGAAGAGATCTCTTCTATGGTGTTGACCAAGATGAAAGAGATTGCAGAAGCTTACCTG 148964 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||||| || ||| || || ||||| || || || |||||||| | || || Sbjct 148963 GGCCAACCAGTGACCAATGTTGTCATCACTGTCCCTGCCTACTTCAATGACTCCCAGCGC 148904 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || ||||||||||| ||| || ||||| | ||||| || |||| || ||||| Sbjct 148903 CAGGCTACTAAAGATGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGAATCATCAATGAG 148844 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || |||||||| || | ||||||||||| ||| || ||| | | || || ||| Sbjct 148843 CCCACAGCAGCAGCCATTGCATATGGACT-GGATAA--AAAGGGCAGAGGGGAGCGCAAT 148787 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 ||| | | ||||| | |||||||| || |||| || | || | ||||| ||| Sbjct 148786 ATTCTCATCTTTGACCTGGGTGGAGGTACCTTTGATGGCTCCATCCTCACCATTGACGAT 148727 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | |||||||| ||||| || ||| ||||| || || ||||| || || |||| Sbjct 148726 GGCATCTTTGAAGTTAAGGCTACAGCTGGCGATACCCACCTGGGAGGAGAGGACTTTGAC 148667 Query 451604 AAT 451606 ||| Sbjct 148666 AAT 148664 >seq1512 Length=586066 Score = 138 bits (152), Expect = 4e-27 Identities = 204/287 (71%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || ||||| || || || |||||||| | || || || || |||||||||| Sbjct 240514 ATGCTGTCATCACTGTCCCTGCCTACTTCAATGACTCCCAGCGCCAGGCTACTAAAGATG 240573 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| || ||||| | ||||| || |||| || ||||| ||||||||||| || Sbjct 240574 CTGGAGTGATCGCTGGGCTGAATGTGCTGAGAATCATCAATGAGCCTACAGCAGCAGCCA 240633 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | ||||||||||| ||| || ||| | | || || |||||| | | ||||| Sbjct 240634 TTGCATATGGACT-GGATAA--AAAGGGCAGAGGGGAGCGCAATATTCTCATCTTTGACC 240690 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | |||||||| || |||| ||||| || | ||||| ||||| | |||||||||| Sbjct 240691 TGGGTGGAGGTACCTTTGATGTCTCTGTTCTCACCATTGACGATGGCATCTTTGAAGTAA 240750 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 || | || ||||| || || || ||||| || || |||| ||| Sbjct 240751 AGTCTACAGCCGGTGACACCCACCTGGGAGGAGAGGACTTTGACAAT 240797 >seq4093 Length=112651 Score = 134 bits (148), Expect = 5e-26 Identities = 247/360 (69%), Gaps = 3/360 (1%) Strand=Plus/Minus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 ||||| || || || ||||| | || || |||||||| | |||||| || | || Sbjct 49306 GAAGAGATCTCTTCCATGGTGTTGACCAAGATGAAAGAGATTGCAGAAGCTTACCTGGGC 49247 Query 451307 TCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAA 451366 ||||| || |||| || || ||||| || || || |||||||| | || || | Sbjct 49246 CAACCAGTGACCAATGCTGTCATCACTGTCCCTGCCTACTTCAATGACTCCCAGCGCCGG 49187 Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||||||||| ||| || ||||| | ||||| || |||| || ||||| ||| Sbjct 49186 GCTACTAAAGATGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGAATCATCAATGAGCCT 49127 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATT 451486 |||||||| || | ||||||||||| ||| || ||| | | || || | |||||| Sbjct 49126 ACAGCAGCAGCCATTGCATATGGACT-GGATAA--AAAGGGTAGAGGGGAGCACAATATT 49070 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 | | ||||| | | |||||| || ||| ||||| || | ||||| |||| Sbjct 49069 CTCATCTTTGACCTGGATGGAGGTACCTTAGATGTCTCTGTCCTCACCATTGACAATGGC 49010 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | |||||||||||| | || || |||| || | ||||| || || |||| ||| Sbjct 49009 ATCTTTGAAGTAAAGTCTACAGCCGGCAATACCCACTTGGGAGGAGAGGACTTTGACAAT 48950 >seq1120 Length=750286 Score = 125 bits (138), Expect = 3e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| |||||||||||||| || || ||||| || || | | Sbjct 84571 ATGCAGATCTTTGTGAAAACTCTGACTGGTAAAACCATCACCCTTGAGGTGGAGCCCAGT 84512 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | |||| || ||||| |||||||||||||| |||||||| ||| Sbjct 84511 GATACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCTGACCAA 84452 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || || ||||||||| | ||| || | || || || Sbjct 84451 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAAC 84392 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || |||| || || ||||| Sbjct 84391 ATTCAGAAAGAGTCAACCCTGCATTTAGT 84363 >seq4389 Length=91308 Score = 123 bits (136), Expect = 1e-22 Identities = 277/414 (67%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || |||||||| | || || | | || || || | ||| | ||| || ||||| Sbjct 70275 GGGAAGCCCTAGGTGCATGTGGAACACAAGGGGGAGAGTAAGAGTTTCTACCCAGAAGAG 70334 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 | || || ||||| | || || |||||||| | |||||| || | || ||| Sbjct 70335 AACTCTTCCATGGTGTTGACCAAGATGAAAGAGATTGCAGAAGCTTACCTAGGCCAACCA 70394 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || |||| || || ||||| | || || |||||||| | || || || || ||| Sbjct 70395 GTGACCAATGCTGTCATCACTGTCCTTGCCTACTTCAATGACTCCCAGCGCCAGGCTACT 70454 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| || ||||| | ||||| || |||| || ||| | ||||||||| Sbjct 70455 AAAGATGCTGGAGTGATCGCTGGGCTGAATGTGCTAAGAATCATCAATAAGCCTACAGCA 70514 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | ||||||||||| ||| || ||| | | || || ||||| | | Sbjct 70515 GCAGCCATTGCATATGGACT-GGATAA--AAAGGGCAGAGGGGAGCGCAATATCCTCATC 70571 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| | |||||||| || |||| || | || | ||||| ||||| | ||| Sbjct 70572 TTTGACCTGGGTGGAGGTACCTTTGATGTCTCCATCCTCACCATTGATGATGGCATCTTT 70631 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||| ||||| | || || |||| || || ||||| || || |||| ||| Sbjct 70632 GAATTAAAGTCTACAGCCGGCAATACCCACCTGGGAGGAGAGGACTTTGACAAT 70685 >seq14380 Length=3375 Score = 116 bits (128), Expect = 1e-20 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| |||||||||||||| || |||||||| || || | | Sbjct 182 ATGCAGATCTTTGTGAAAACTCTGACTGGTAAAACCATCACTCTTGAGGTGGAGCCCAGT 123 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | |||| || ||||| |||||||||||||| |||||||| ||| Sbjct 122 GATACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCTGACCAA 63 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || || ||||||||| | ||| || | || || || Sbjct 62 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAAC 3 Query 391230 AT 391231 || Sbjct 2 AT 1 >seq4189 Length=103548 Score = 113 bits (124), Expect = 2e-19 Identities = 234/346 (68%), Gaps = 3/346 (1%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||| || || || ||| | | || || |||||||| | |||||| || | Sbjct 54767 CCAGAAGAGATCTCTTCCATGATGTTGACCAAGATGAAAGAGATTGCAGAAGCTTACCTG 54708 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || ||||| || |||| || || ||||| || || || |||||||| | || | Sbjct 54707 GGCCAACCAGTGACCAATGCTGTCATCACTGTCCCTGCCTACTTCAATGACTCCCAGCAC 54648 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || ||||||||||| ||| || |||| | ||||| || |||| || ||||| Sbjct 54647 CAGGCTACTAAAGATGCTGGAGTAATCACTGGCCTCAATGTGCTGAGAATCATCAATGAG 54588 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || |||||||| || | ||||||||| | ||| || ||| | | | || ||| Sbjct 54587 CCCACAGCAGCAGCCATTGCATATGGA-TTGGATAA--AAAGGGCATGGGGGAGCGCAAT 54531 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 ||| | | ||||| | |||||||| || |||| || | || | ||||| ||| Sbjct 54530 ATTCTTATCTTTGACCTGGGTGGAGGTACCTTTGATGTCTCCATCCTCACCATTGATGAT 54471 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAG 451589 || | ||| |||| ||||| || ||| ||||| || || |||| Sbjct 54470 GGTATCTTTCAAGTCAAGGCTACAGCTGGCGATACCCACCTGGGAG 54425 >seq2 Length=8563611 Score = 100 bits (110), Expect = 1e-15 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 451317 CTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAG 451376 || |||| || || || || || || ||||| ||||| | || || || || ||||||| Sbjct 16933 CTAATGCTGTTATCACCGTACCAGCATATTTTAATGACTCTCAGCGACAGGCTACTAAAG 16874 Query 451377 ATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTG 451436 |||| ||| |||| |||| | ||||| ||||| |||||||||||||| || || |||| Sbjct 16873 ATGCTGGAACTATTTCTGGACTCAATGTACTTCGTATTATTAATGAACCCACTGCTGCTG 16814 Query 451437 CTCTAGCATATGG 451449 || | || ||||| Sbjct 16813 CTATTGCTTATGG 16801 Score = 91.5 bits (100), Expect = 6e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| |||| ||||| ||||||||||||| ||| ||||| ||||| | ||| |||| || Sbjct 18032 AGCAGTTGGCATTGACCTTGGAACCACCTATTCTTGTGTGGGTGTCTTTCAACATGGTAA 17973 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGA 451000 || |||||||| ||||||||||| ||| Sbjct 17972 AGTTGAAATTATTGCAAATGACCAGGGA 17945 >seq961 Length=839160 Score = 87.8 bits (96), Expect = 7e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || || ||||| ||||| |||||||| || |||||||||||| | || |||||| Sbjct 413777 CAGGCTACAAAGGATGCTGGACAGATTGCTGGATTGAATGTTCTTCGAGTAATCAATGAA 413718 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461 ||||| || ||||| | || |||||||| | ||||| Sbjct 413717 CCTACTGCTGCTGCATTGGCCTATGGACTCGACAAATC 413680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975140762298452