Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq889 95.1 1e-14 seq470 87.8 2e-12 >seq889 Length=882587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 |||||||| | || || || |||| ||| || ||| || || |||| |||| ||| Sbjct 337231 GTGTACTCGACAACCTCCGTGCACAGGTTACTACACTTGATGGTGCCCAGGTTCTGCTGG 337290 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||||| ||||||| || |||||||| | |||||| || || || ||||||||||| Sbjct 337291 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAAACCATGTAAGGGGTGCCAGTCTCCGTCTGA 337350 Query 106625 GACTTGAGAATTGCCTTCCACA 106646 |||| || || || | ||||| Sbjct 337351 GACTCGATGATGGCGTACCACA 337372 >seq470 Length=1305644 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || ||||| || ||||||||||||||||||||||| || || ||| ||| || ||||| Sbjct 605222 TACTCCCCTACACGCTTCTCAAAGAAGTTGGTCTTGCCTTCCAGGGAAATATTCTCCATG 605163 Query 117046 AAGTCAAATGGATTCT 117061 |||||||||||||||| Sbjct 605162 AAGTCAAATGGATTCT 605147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589812515351560