Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq196 125 1e-23 seq187 87.8 3e-12 >seq196 Length=2029030 Score = 125 bits (138), Expect = 1e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 241425 GTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGT 241484 |||| || ||||| ||||| |||| ||| || || || || || ||||||||||| | Sbjct 21287 GTTTCAGCTGGGCTACCTGCTCCCTCAGCACACTGGCTGTGTTTGAAAGTCCTGCGTTTT 21346 Query 241485 CAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGC 241544 | | ||||| | || ||||| || |||||| || || | ||||||||| ||| | Sbjct 21347 CTGTTTTGAGGATTTTGACTTTGTCTTCCAGCTTGGCAATCCTTTCCAGTTTCCGCTTCC 21406 Query 241545 GGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCT 241604 ||| || |||||||||| | ||| | || | ||| ||||| || ||||| | ||||| Sbjct 21407 TGCACTTAGTGGCTGCCATCCTGTTTCTTAGCCGCTTTCGTTCTGCTTTGATCCTTTCCT 21466 Query 241605 GGTCCTCCATGTCGATCGGAGAC-TTGGG 241632 ||| ||||||||| || || ||| ||||| Sbjct 21467 GGTTCTCCATGTCTATGGGGGACATTGGG 21495 >seq187 Length=2081563 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 |||| |||| ||||||||| | |||||||| || |||||||||| ||| | | Sbjct 727269 CTTCATCCCTACTGATGAGCTCATTGGAGAAAGTCAGGCCAGGCATGAGATCCCGTTTCT 727328 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 | |||||||| || || ||||| ||||||||||| ||||| ||||| || || || || | Sbjct 727329 TTAGCCAGAAGATGGCAGCGAAGGAGCCAGAGAAAAAGATCCCCTCAACAGCAGCAAAAG 727388 Query 48273 C 48273 | Sbjct 727389 C 727389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931267091912960