Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq889 95.1 1e-14 seq470 87.8 2e-12 >seq889 Length=882587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || |||||||||||||| || || || ||| |||||||||| Sbjct 337370 TGGTACGCCATCATCGAGTCTCAGACGGAGACTGGCACCCCTTACATGGTTTACAAGGAC 337311 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || |||| |||||| ||||| |||| |||| || |||||| | || || ||| Sbjct 337310 GCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGTAGTAACCTGTGC 337251 Query 75998 ACGGAAATTTTAGAGTACAC 76017 ||||| || | |||||||| Sbjct 337250 ACGGAGGTTGTCGAGTACAC 337231 >seq470 Length=1305644 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500 |||||||||||||||| ||||| || ||| ||| || || ||||||||||||||||||| Sbjct 605147 AGAATCCATTTGACTTCATGGAGAATATTTCCCTGGAAGGCAAGACCAACTTCTTTGAGA 605206 Query 65501 AGCGAGTTGGGGACTA 65516 |||| || ||||| || Sbjct 605207 AGCGTGTAGGGGAGTA 605222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596399435978720