Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq470 89.7 5e-13 >seq470 Length=1305644 Score = 89.7 bits (98), Expect = 5e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | ||| ||||| | ||| | |||||| |||| | ||| ||||| Sbjct 1269843 AGTATATGGGGACCAACCTGTGATGGACTTGATCGTATTGTTGAGCGCTTTGACTTGCCA 1269784 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 |||||||| || || |||||| | | ||||| || ||||| ||||||| | | | || Sbjct 1269783 GAGCTTCATGTTGGAGACTGGATGCTGTTTGAGAATATGGGTGCTTACACAGTTG-CTGC 1269725 Query 21245 T-CTTCAACCTTTAACGGCTTCC 21266 | |||| || ||||| ||||||| Sbjct 1269724 TGCTTCTACTTTTAATGGCTTCC 1269702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463413379411920