Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1120 95.1 1e-14 seq33 86.0 6e-12 seq14380 84.2 2e-11 >seq1120 Length=750286 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | || || || || || || |||||||||||||| | ||| | Sbjct 84354 AGACGCAGCACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGT 84413 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| ||||| |||| |||||| || || || || || ||||| Sbjct 84414 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATTCCTTCC 84473 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || || | ||| || | ||||| || || || Sbjct 84474 TTATCCTGAATCTTGGCCTTAACATTTTCAATTGTATCACTGGGCTCCACCTCAAGGGTG 84533 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||||||||| || | |||||| || || || ||||| ||| Sbjct 84534 ATGGTTTTACCAGTCAGAGTTTTCACAAAGATCTGCATCTTG 84575 >seq33 Length=3581497 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| |||||||| ||||| || || ||||||||||| ||||||||||| Sbjct 768895 TTGCCACCACGGAGACGCAACACCAGGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCA 768954 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || Sbjct 768955 GACAGGGTGCGCCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCTGGG 769014 Query 134604 GG 134605 || Sbjct 769015 GG 769016 >seq14380 Length=3375 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| ||||| |||| |||||| || || || || || ||||| || Sbjct 28 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTA 87 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || ||||| || || || || | ||| || | ||||| || ||||| ||| Sbjct 88 TCCTGAATCTTGGCCTTAACATTTTCAATTGTATCACTGGGCTCCACCTCAAGAGTGATG 147 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||| || | |||||| || || || ||||| ||| Sbjct 148 GTTTTACCAGTCAGAGTTTTCACAAAGATCTGCATCTTG 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505254241423880