Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1985 86.0 9e-12 >seq1985 Length=426725 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 214016 TACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAACCCAGCGTTCCCGAA 214075 ||||||||||| || || || | || ||| ||| |||| ||| | || | || Sbjct 330753 TACCCTCCTACTGTTAAAGATGTCCAAGTAGCCATGACTTACCCTCCCCACATTGCAGAG 330812 Query 214076 AAGTT-ACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTA 214134 | || | |||| || |||| | || | ||||| ||||| || || | ||| |||| Sbjct 330813 GACTTTAAGTTT-GCTGTGGGCCAGGAAGTCTTTGGCCTCGTCCCTGGACTAATGATGTA 330871 Query 214135 CGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCC 214194 | | |||||||| || ||||||||||| ||||| ||| | || || || || || || Sbjct 330872 TTCAGTAATCTGGCTTAGGGAGCACAACAGAGTTTGTGACATTCTTAAGCAGGAACATCC 330931 Query 214195 GGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||||| | || |||| |||||||||| Sbjct 330932 AGAATGGGATGATGAACGTCTGTTCCAGA 330960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723134476078560