Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq272 120 2e-22 >seq272 Length=1747054 Score = 120 bits (132), Expect = 2e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||||||| ||||||||||| || |||| | |||||||||||| || || || ||| Sbjct 1531378 CCTGTGATGTGAGCAATCATGTAAGTAAGTAAAGAGTAACTAGCAATATTGAAGGGGACA 1531319 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || | ||||| |||||||| || || || ||||| || || |||| | | ||| ||| Sbjct 1531318 CCCAACCCCATGTCTCCCGACCTCTGGTAGAGCTGGCAAGACAGTTCACCATTTGATACA 1531259 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || || ||| ||||||| ||||| | |||||| Sbjct 1531258 TAGAACTGGCAGAGTGCATGACATGGAGGGAGAGCCATC 1531220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391836597356497