Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1120 118 9e-22 seq14380 86.0 5e-12 >seq1120 Length=750286 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||||||||| || || | || || ||||| ||||| || Sbjct 84571 ATGCAGATCTTTGTGAAAACTCTGACTGGTAAAACCATCACCCTTGAGGTGGAGCCCAGT 84512 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || ||||| || || ||||| || || || || ||| Sbjct 84511 GATACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCTGACCAA 84452 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || ||||||| | || | || || |||||| Sbjct 84451 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAAC 84392 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | ||||| || ||||| |||| ||||| || Sbjct 84391 ATTCAGAAAGAGTCAACCCTGCATTTAGTGCTGCGTCTGCGTGGTGGTAT 84342 >seq14380 Length=3375 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||||||||| || || | || |||||||| ||||| || Sbjct 182 ATGCAGATCTTTGTGAAAACTCTGACTGGTAAAACCATCACTCTTGAGGTGGAGCCCAGT 123 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || ||||| || || ||||| || || || || ||| Sbjct 122 GATACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAGGAAGGAATCCCTCCTGACCAA 63 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 |||||| | || | || ||||| || ||||||| Sbjct 62 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGA 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434794344962880