Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12]
22,819 sequences; 2,860,591,921 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1120 96.9 8e-15
seq14380 84.2 5e-11
>seq1120
Length=750286
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| || || |||||||| || |||||||| || | | ||| | ||||||
Sbjct 84360 AGCACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGTCCATCT 84419
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||| ||||| | | |||||||||||| ||
Sbjct 84420 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTATCC 84479
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
||||| || || ||| | || | ||| | ||| ||| || ||||| || ||
Sbjct 84480 TGAATCTTGGCCTTAACATTTTCAA--TTGTAT-CACTGGGCTCCACCTCAAGGGTGATG 84536
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || ||||| ||||| |||| |||||| ||
Sbjct 84537 GTTTTACCAGTCAGAGTTTTCACAAAGATCTGCATCTT 84574
>seq14380
Length=3375
Score = 84.2 bits (92), Expect = 5e-11
Identities = 133/188 (71%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 151923 ATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTC 151982
|||||||| || | | ||| | |||||||| || || || || ||||| || | |
Sbjct 1 ATGTTGTAGTCAGACAGAGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGC 60
Query 151983 TGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTG 152042
|| ||||| | | |||||||||||| || ||||| || || ||| | || | ||
Sbjct 61 TGTTGGTCAGGAGGGATTCCTTCCTTATCCTGAATCTTGGCCTTAACATTTTCAA--TTG 118
Query 152043 TCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACC 152099
| | ||| ||| || |||||||| || ||||| || || ||||| ||||| |||| |
Sbjct 119 TAT-CACTGGGCTCCACCTCAAGAGTGATGGTTTTACCAGTCAGAGTTTTCACAAAGATC 177
Query 152100 TGCATTTT 152107
||||| ||
Sbjct 178 TGCATCTT 185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153483459215549
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |