Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq1985 141 1e-28 >seq1985 Length=426725 Score = 141 bits (156), Expect = 1e-28 Identities = 197/276 (71%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 8309 CCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCC 8368 ||||| || |||||||| || || || | | || | || || ||| || ||| Sbjct 335191 CCCTTTACATTGCTACAAACAAGTTTTTGTAAGGAAGCAGTATTCACAATCTGAAAGCCC 335132 Query 8369 ACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATG 8428 || | ||||| ||||| || || |||||||| | ||||||||||| || | || Sbjct 335131 ACATTCCCGCCAAAGGTACTTGGTTTCCAGTATTCAGGGGAGCAGATAGGATTTCCTATC 335072 Query 8429 AGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTG 8488 ||||| || | |||||| || || |||| || | ||| |||| || ||||| || Sbjct 335071 AGGCCCTTCAAGGAGAATGGGGCACCCATTTCTACCATGGTCTCTCCAAAGATAGCACCA 335012 Query 8489 GGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAA 8548 || || ||||| || |||| || |||| ||| ||||||||||| || |||||||||||| Sbjct 335011 GGGCGAGGCTTCTCTACCATTAAGCCGGGGTATAGCTCCACAGCGTCTACGTCTCCGTAA 334952 Query 8549 AGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584 || | |||||| ||||| || ||||| |||||| Sbjct 334951 AGTTCTTGGAGTTCTGCAGCCATTTCCTTCTCTCCT 334916 Score = 123 bits (136), Expect = 4e-23 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 || |||| ||| ||||||||||| | || ||| ||||||||||||||| || || ||| Sbjct 330973 ATCAGTCTAGTTGTCTGGAACAGACGTTCATCATCCCATTCTGGATGTTCCTGCTTAAGA 330914 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 | || || || |||||||| ||||| |||||||| | |||||||| || ||||| Sbjct 330913 ATGTCACAAACTCTGTTGTGCTCCCTAAGCCAGATTACTGAATACATCATTAGTCCAGGG 330854 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 || |||||||| | || || || ||||| | | || || | | | |||||| Sbjct 330853 ACGAGGCCAAAGACTTCCTGGCCCACAGCAAACTTAAAGTCCTCTGCAATGTGGGGAGGG 330794 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 || ||||| || ||||| ||||| || | || || ||||| || || | |||||| Sbjct 330793 TAAGTCATGGCTACTTGGACATCTTTAACAGTAGGAGGGTACATCTCTCCATTGATCATC 330734 Query 9484 T 9484 | Sbjct 330733 T 330733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716672319853760