Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq53 165 1e-35 >seq53 Length=3035741 Score = 165 bits (182), Expect = 1e-35 Identities = 136/166 (82%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| || | ||||||||| ||||| | ||||||||| |||||||| Sbjct 2982882 CTTGAGACCAGTGATGTGTGCAATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAA 2982941 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||||||| || |||| ||| |||| ||||||||||||||||| || ||||| || | Sbjct 2982942 GGGCACCCCAAGTCCCAGGTCAGCCGATCGCTGGTACAGCTGGCATGACAGCTCTCCATC 2983001 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 ||| |||||||| |||||||| |||||| || ||||| |||||| Sbjct 2983002 CGCGACGTAGAATTGGCACAGTGCGTGGCATGGAGGCAGCGCCATG 2983047 Score = 132 bits (146), Expect = 6e-26 Identities = 126/159 (79%), Gaps = 8/159 (5%) Strand=Plus/Plus Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 |||| |||||||| | ||||||||| |||||||| || |||||||| || |||| | Sbjct 2983595 CGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGACCCAGGTCTCC---CTCCTCGC 2983651 Query 146105 GCCCC----AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 || | ||||| ||| || | |||||| |||| || ||||||||||||||||||||| Sbjct 2983652 GCTCGGGGAAGCCCTGCC-GGTCCAGGAAGGCCCGCGAGCCGTTGGCGTCCCAGATCTTG 2983710 Query 146161 ACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||||| | ||||||||||| |||| | ||||||||| Sbjct 2983711 ACGCCCTTGGCGGAGAGCTCCTTGGCATTGGTGGACCCC 2983749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589441545445000