Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq150 93.3 9e-14 >seq150 Length=1484899 Score = 93.3 bits (102), Expect = 9e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| || ||| | ||| | |||||||| |||||| | ||||| ||| || || Sbjct 1033426 CTGCCCGCCGTTTAAGATTGTGGTGCTGGACGAAGCGGACTCGATGACATCCGCGGCCCA 1033485 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGT-GACGCGTTTTTGCCTGGTGT 254319 | |||| || ||||| |||||||| |||| || | |||||| || ||||| | | Sbjct 1033486 GGCCGCGCTGCGCCGCACGATGGA-ACGCGAGACGAAGACGACGCGATTCTGCCTCATCT 1033544 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||||||||||| ||||| | || || |||| || ||| ||||||| || |||| Sbjct 1033545 GCAACTACGTGAGCCGCATCATTGAGCCACTCACTTCGCGCTGCTCCAAGTTCCGCTTCA 1033604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072581523944000