Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq144 122 1e-22 seq416 114 2e-20 >seq144 Length=1555788 Score = 122 bits (134), Expect = 1e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 |||||||| | || |||||||| |||||||||||||| || |||||||| ||| ||| Sbjct 1170359 TTGACGATGTCGAAGCCCACGTCGCCGCCGAAGGTGCTCGGCTTCCAGTAGAGCGGCGAG 1170300 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 || | | ||| |||||| || ||||| || ||||| ||||| | ||| | |||||| Sbjct 1170299 CACACGGGGTTGCTCATGAGACCCTTGAGCGAGAACGGCGCCCCAATCTCCACCATGCTC 1170240 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 || ||||| |||| | | || | ||| || ||| || || ||| |||||||| Sbjct 1170239 TCGCCGAACATGGAGCCCTGGCGCGACTTCTCGGCCAGGAGGCCCACGTAGAACTCCACG 1170180 Query 8921 GCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || || | ||| ||||| || || | ||||| || || |||| || |||| Sbjct 1170179 GCGTCCACGTCGCCGTACAGTTCCTCCATCTCGGCTGCCATCTCCTCGTCGCCTG 1170125 >seq416 Length=412842 Score = 114 bits (126), Expect = 2e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824 || ||||| |||||||| |||||||| | || ||||||||| |||| |||||||||| Sbjct 5484 CCCCCGAATGTGCTGGGCTTCCAGTACTCGGGCGAGCAGATGGGGTTCCCCATGAGGCCC 5543 Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884 ||||| || || || || |||| ||| | || |||| |||||||||||| ||| || Sbjct 5544 TTGAGCGAGAAGGGGGCGCCCATCTCCACCATCGTCTCGCCGAAGATGGCGCCGGGCCGC 5603 Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGGGCC 8944 ||| ||||| | || || | ||| | ||||| || || | ||| ||||| | | Sbjct 5604 GGCCGTTCCAAGATGAGCCCCGGGTAGAGCTCCAGGGCGTCCACGTCGCCGTACATCTCG 5663 Query 8945 CTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 | || || || || || ||| | || |||| Sbjct 5664 CGCAGCTCCGCGGCCATCTCCGTCTCGCCTG 5694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707762028770000