Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1990 134 2e-27 >seq1990 Length=32249 Score = 134 bits (148), Expect = 2e-27 Identities = 187/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || || ||||||| || || || |||||||| || ||||||||||| || || Sbjct 31109 CGCAAAACGCCATCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 31168 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || ||||| || || || || ||||| |||| || | |||| || |||| Sbjct 31169 CCGCCGCCTCGCTCGCCGAGGCGGTGTGAAGCGCATCTCGGGCCTCATCTACGAGGAGAC 31228 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | | ||||| ||||||| ||| ||| |||| || || || ||| || || Sbjct 31229 CCGCGGCATCCTGAAGGTCTTCCTTGAGAACGTCATCCGCGACGCCGTCACCTACACGGA 31288 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || || || || Sbjct 31289 GCACGCCAATCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCCCTCAAGCGCCAGGG 31348 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | || || |||||| Sbjct 31349 CCGCACACTCTACGGCTTTGGA 31370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78996455309625