Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq8098 104 2e-17 seq81637 98.7 9e-16 seq20 82.4 7e-11 >seq8098 Length=4112 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| ||||||| |||||||| || || || || || || Sbjct 20 GACACCATCGAGAATGTCAAGGCAAAGATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 79 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || |||||| ||||| ||||||| | | | || ||||| ||| Sbjct 80 CAGAGGCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACGCTCGCAGACTACAAC 139 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || ||||| |||| |||||||| | || |||||||| Sbjct 140 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTTCGGCTGAGAGGAGG 186 >seq81637 Length=1039 Score = 98.7 bits (108), Expect = 9e-16 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | ||||| |||||| |||||||| ||||| || || || ||| Sbjct 768 GACACCATCGAGAATGTCAAGGCCAAGATTCAGGACAAAGAGGGGATTCCCCCAGACCAA 709 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || | || || | || |||||| || || ||||||| | | ||| || ||||| || Sbjct 708 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCG-TACGCTGGCAGACTACAA 650 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||| || ||||| |||| |||||||| | ||| |||| || Sbjct 649 CATCCAAAAGGAGTCTACCCTCCACCTGGTCCTCCGGCTTCGAGGTGG 602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || ||| ||| || ||||| || ||||| || || || || Sbjct 540 GACACCATCGAGAACGTGAAAGCAAAAATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 481 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || |||| || ||||| || || ||||||| | | | || ||||| ||| Sbjct 480 CAGCGGCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCGCGGACTACAAC 421 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || |||||| | ||||||||||| | || || ||||| Sbjct 420 ATCCAAAAGGAGTCTACTCTGCATCTGGTCCTTCGGCTGAGGGGAGG 374 >seq20 Length=4946952 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || || | |||||| | || | || ||| Sbjct 2722412 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCAAGT 2722353 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| || || ||||| || |||||||| || Sbjct 2722352 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCCGACCAG 2722293 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| || | || ||||| || || ||||||| | | | |||||| ||| Sbjct 2722292 CAGCGACTAATCTTCGCAGGCAAGCAGCTGGAAGATGGCCGCACGCTGTCCGACTACAAC 2722233 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || |||||||| || |||| ||||||||| Sbjct 2722232 ATCCAGAAAGAATCCACCCTCCACCTGGTCCTG 2722200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478147090010000