Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq29999 131 1e-25 seq994 131 1e-25 seq462 131 1e-25 seq85054 127 1e-24 seq5198 127 1e-24 seq2775 122 6e-23 seq663 113 3e-20 seq18965 95.1 8e-15 seq10910 95.1 8e-15 seq5019 95.1 8e-15 seq4460 89.7 3e-13 >seq29999 Length=1888 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 1355 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGGGAATCTCGT 1296 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1295 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1261 >seq994 Length=111753 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 42259 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGGGAATCTCGT 42200 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 42199 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 42165 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 808 CTCTCTCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTAATTGTCGTCTATCGGTCTCAA 749 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 748 GCCCATATTTAGCCTTA 732 >seq462 Length=363519 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 338819 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGGGAATCTCGT 338760 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 338759 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 338725 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 331478 CTCTCTCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCGTCTATCAGTCTCAT 331419 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 331418 GCCCGTATTTAGCCTTA 331402 >seq85054 Length=1009 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 418 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGGGAATCTCGT 477 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 478 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 512 >seq5198 Length=5425 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||||||||| || |||||||| Sbjct 1344 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGATAGGGACAGTGGGAATCTCGT 1403 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1404 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1438 >seq2775 Length=17168 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| |||||||||||||| || |||||||| Sbjct 3936 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGATAGGGATGGTGGGAATCTCGT 3877 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||| ||||||||||||||||||| Sbjct 3876 TCATCCATTCATGCGTGTCACTAATTAGATGACGA 3842 >seq663 Length=222059 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||| ||||||||| || |||||||||||||| || |||||| | Sbjct 96774 AAGCCCGTTCCCTTGTCTGTGGTTTTACTGGATAGTAGATAGGGATGGTGGGAATCTCAT 96833 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||| ||||||||||||||||||| Sbjct 96834 TAATCCATTCATGCGTGTCACTAATTAGATGACGA 96868 >seq18965 Length=2431 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 2263 CTCTCTCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTAATTGTCGTCTATCGGTCTCAA 2322 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 2323 GCCCATATTTAGCCTTA 2339 >seq10910 Length=3381 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 656 CTCTCTCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCGTCTATCGGTCTCAT 597 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 596 GCCCGTATTTAGCCTTA 580 >seq5019 Length=5553 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3808 CTCTCTCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCGTCTATCGGTCTCAT 3749 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 3748 GCCCGTATTTAGCCTTA 3732 >seq4460 Length=6249 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 901 CTCTCTCTTCAGAGTTATTTTCAACTTTCCCTCACGGTACTTGTCGTCTATCGGTCTCAT 842 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 841 GCCCGTATTTAGCCTTA 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334595623194875