Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq81637 111 1e-19 seq1985 104 2e-17 seq20 102 7e-17 >seq81637 Length=1039 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || ||||| |||||||| || || |||||| |||||| || || || || Sbjct 632 GTAGACTCCTTTTGGATGTTGTAGTCTGCCAGCGTACGACCATCTTCCAGCTGCTTGCCG 691 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||||||||| || ||||| || |||||||| |||||| || Sbjct 692 GCGAAGATCAGGCGCTGTTGGTCTGGGGGAATCCCCTCTTTGTCCTGAATCTTGGCCTTG 751 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || || || |||| || | || ||||| ||||| || Sbjct 752 ACATTCTCGATGGTGTCAGAGGCCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 811 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 812 TTCACGAAGATCTGCATGCCT 832 >seq1985 Length=32442 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| || | || ||| |||||| ||||| || || Sbjct 32394 GTAGACTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGACCATCTTCCAGTTGCTTGCCG 32335 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||||||||| || |||||||| || ||||| |||||| || Sbjct 32334 GCGAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTG 32275 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | || || || |||| || | || ||||| |||||||| Sbjct 32274 ACATTCTCAATCGTGTCAGAGGCCTCCACCTCCAGAGTGATGGTCTTGCCCGTCAGAGTC 32215 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 32214 TTCACGAAGATCTGCAT 32198 >seq20 Length=4946952 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | || | || |||||||| || |||||||| ||| Sbjct 2722183 ATCCCACCACGGAGACGCAGGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCG 2722242 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| || || || || ||| |||| || ||||| ||||| ||| Sbjct 2722243 GACAGCGTGCGGCCATCTTCCAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCGGGA 2722302 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||| || | | || | |||||| | | || Sbjct 2722303 GGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTTGGCTCC 2722362 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || ||||| ||||| || || || || ||||||||| Sbjct 2722363 ACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 2722413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419693406583500